RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 APBB2Q92870 758 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 IL17RAQ96F46 866 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 RWDD1Q9H446 243 aaPredicted RBP16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 FRMPD4Q14CM0 1322 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 C19orf67A6NJJ6 358 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 CHRNA1P02708 482 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 LINC00271P0C7V0 271 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 CTNNB1P35222 781 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 SP4Q02446 784 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 TRAF1Q13077 416 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 RPAINQ86UA6 219 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 FIBCD1Q8N539 461 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 PIBF1Q8WXW3 757 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 PRKAG3Q9UGI9 489 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 PLXNA4Q9HCM2 1894 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 EVPLQ92817 2033 aa16.94■□□□□ 0.3
SEC61A1-207ENST00000498837 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 GRM6O15303 877 aa16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 FIBPO43427 364 aa16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 STAM2O75886 525 aa16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 DLX2Q07687 328 aaPredicted RBP16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 CLUL1Q15846 466 aa16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 RUFY4Q6ZNE9 571 aa16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 ZNF215Q9UL58 517 aaPredicted RBP16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 FAM50BQ9Y247 325 aa16.93■□□□□ 0.3
SEC61A1-207ENST00000498837 C5orf67F2Z3F1 127 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 GHRP10912 638 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 IRS1P35568 1242 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 BMPR1AP36894 532 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 HYAL1Q12794 435 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 TROAPQ12815 778 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 CTC1Q2NKJ3 1217 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 ADHFE1Q8IWW8 467 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 EHMT1Q9H9B1 1298 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 TAF6LQ9Y6J9 622 aa16.92■□□□□ 0.3
SEC61A1-207ENST00000498837 ENPP3O14638 875 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 CSPG5O95196 566 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 RB1P06400 928 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 CYP21A2P08686 494 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 MGAT3Q09327 533 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 TRDNQ13061 729 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 LPIN1Q14693 890 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 FBXL18Q96ME1 805 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 C11orf84Q9BUA3 381 aaPredicted RBP16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 RC3H2Q9HBD1 1191 aaKnown RBP16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 ADGRA3Q8IWK6 1321 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 NRCAMQ92823 1304 aa16.91■□□□□ 0.3
SEC61A1-207ENST00000498837 FNDC1Q4ZHG4 1894 aaPredicted RBP16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 MBTPS2O43462 519 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 NCK2O43639 380 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 TCF7P36402 384 aaPredicted RBP16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 MRE11P49959 708 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 PTH1RQ03431 593 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 WTAPQ15007 396 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 PCNX4Q63HM2 1172 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 CLP1Q92989 425 aaKnown RBP16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 ZNF689Q96CS4 500 aaPredicted RBP16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 SENP7Q9BQF6 1050 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 LMAN2LQ9H0V9 348 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 IGFLR1Q9H665 355 aa16.9■□□□□ 0.3
SEC61A1-207ENST00000498837 ERICH2A1L162 156 aa16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 MEIS2O14770 477 aa16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 LINC01565O15544 149 aa16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 ATP9AO75110 1047 aa16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 NHLH1Q02575 133 aa16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 SMAD2Q15796 467 aaKnown RBP16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 HFE2Q6ZVN8 426 aa16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 SMARCC2Q8TAQ2 1214 aa16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 ALG13Q9NP73 1137 aaKnown RBP16.89■□□□□ 0.29
SEC61A1-207ENST00000498837 GSTTP1A0A1W2PQM5 241 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 E7EWF7 191 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 TBX10O75333 385 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 MARK3P27448 753 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 PPFIA1Q13136 1202 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 AAMPQ13685 434 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 CAMK1Q14012 370 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 BTG3Q14201 252 aaPredicted RBP16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 GRIK4Q16099 956 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 FBXO47Q5MNV8 452 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 MARCH8Q5T0T0 291 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 TAF2Q6P1X5 1199 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 DNAJB3Q8WWF6 145 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 ZBTB10Q96DT7 871 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 UPF3BQ9BZI7 483 aaKnown RBP16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 MUTYHQ9UIF7 546 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 RWDD3Q9Y3V2 267 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 CDY2AQ9Y6F7 541 aa16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
SEC61A1-207ENST00000498837 DGKIO75912 1065 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 KCNA2P16389 499 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 ANTXR2P58335 489 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 XRRA1Q6P2D8 792 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 CATIPQ7Z7H3 387 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 RTN4RL1Q86UN2 441 aaPredicted RBP16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 NLRX1Q86UT6 975 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 NCOA7Q8NI08 942 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 IGDCC4Q8TDY8 1250 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 LINC01599Q8WXQ3 324 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms