RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CKBP12277 381 aa17.47■□□□□ 0.39
NUP50-219ENST00000497960 ANKRD1Q15327 319 aa17.47■□□□□ 0.39
NUP50-219ENST00000497960 CYP2W1Q8TAV3 490 aa17.47■□□□□ 0.39
NUP50-219ENST00000497960 TIFAQ96CG3 184 aa17.47■□□□□ 0.39
NUP50-219ENST00000497960 VWCEQ96DN2 955 aa17.47■□□□□ 0.39
NUP50-219ENST00000497960 KIF2CQ99661 725 aa17.47■□□□□ 0.39
NUP50-219ENST00000497960 MSRAQ9UJ68 235 aa17.47■□□□□ 0.39
NUP50-219ENST00000497960 TELO2Q9Y4R8 837 aa17.47■□□□□ 0.39
NUP50-219ENST00000497960 MEIS1O00470 390 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 AK2P54819 239 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 STK3Q13188 491 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 RAB30Q15771 203 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 NIPA1Q7RTP0 329 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 GLG1Q92896 1179 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 GUCD1Q96NT3 240 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 PBX4Q9BYU1 374 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 TTYH1Q9H313 450 aaPredicted RBP17.46■□□□□ 0.39
NUP50-219ENST00000497960 RNPEPQ9H4A4 650 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 SH3GLB2Q9NR46 395 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 VPS54Q9P1Q0 977 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 SLC9A2Q9UBY0 812 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 MYO9BQ13459 2157 aa17.46■□□□□ 0.39
NUP50-219ENST00000497960 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.38
NUP50-219ENST00000497960 NFASCO94856 1347 aa17.46■□□□□ 0.38
NUP50-219ENST00000497960 GSTTP1A0A1W2PQM5 241 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 ARP10275 920 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 HOXC8P31273 242 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 THPOP40225 353 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 NLRP5P59047 1200 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 HIC1Q14526 733 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
NUP50-219ENST00000497960 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
NUP50-219ENST00000497960 SMARCAD1Q9H4L7 1026 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 AGO4Q9HCK5 861 aaKnown RBP17.45■□□□□ 0.38
NUP50-219ENST00000497960 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 ERAP1Q9NZ08 941 aa17.45■□□□□ 0.38
NUP50-219ENST00000497960 SCN5AQ14524 2016 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 TREHO43280 583 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 ST18O60284 1047 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 CDKL5O76039 1030 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 DEXIO95424 95 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 CYP3A4P08684 503 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 ATP2A2P16615 1042 aaKnown RBP17.44■□□□□ 0.38
NUP50-219ENST00000497960 PBX2P40425 430 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 ZNF618Q5T7W0 954 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 WNT8BQ93098 351 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 CDX2Q99626 313 aaPredicted RBP17.44■□□□□ 0.38
NUP50-219ENST00000497960 AZI2Q9H6S1 392 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 NRCAMQ92823 1304 aa17.44■□□□□ 0.38
NUP50-219ENST00000497960 BAIAP3O94812 1187 aa17.43■□□□□ 0.38
NUP50-219ENST00000497960 SETQ01105 290 aaPredicted RBP17.43■□□□□ 0.38
NUP50-219ENST00000497960 TET1Q8NFU7 2136 aa17.43■□□□□ 0.38
NUP50-219ENST00000497960 RASGRP4Q8TDF6 673 aa17.43■□□□□ 0.38
NUP50-219ENST00000497960 TNPO1Q92973 898 aaKnown RBP17.43■□□□□ 0.38
NUP50-219ENST00000497960 SLC9A7Q96T83 725 aa17.43■□□□□ 0.38
NUP50-219ENST00000497960 ZNF576Q9H609 170 aa17.43■□□□□ 0.38
NUP50-219ENST00000497960 KAT6AQ92794 2004 aa17.43■□□□□ 0.38
NUP50-219ENST00000497960 EMSYQ7Z589 1322 aa17.43■□□□□ 0.38
NUP50-219ENST00000497960 TANC1Q9C0D5 1861 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 RSPH10B2B2RC85 870 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 FAM86B1E9PN63 330 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 NBNO60934 754 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 CAND2O75155 1236 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 LGR5O75473 907 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 CXCL10P02778 98 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 FAM86B2P0C5J1 330 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 RSPH10BP0C881 870 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 MARK3P27448 753 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 KCNJ6P48051 423 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 ACTR2P61160 394 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 PPFIA1Q13136 1202 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 ITGB3BPQ13352 177 aaPredicted RBP17.42■□□□□ 0.38
NUP50-219ENST00000497960 GPNMBQ14956 572 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 CNKSR3Q6P9H4 555 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
NUP50-219ENST00000497960 PHOSPHO2Q8TCD6 241 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 LMBR1Q8WVP7 490 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 CRYGNQ8WXF5 182 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 TPCN1Q9ULQ1 816 aa17.42■□□□□ 0.38
NUP50-219ENST00000497960 LAMA2P24043 3122 aaKnown RBP17.42■□□□□ 0.38
NUP50-219ENST00000497960 DDX39AO00148 427 aaKnown RBP17.41■□□□□ 0.38
NUP50-219ENST00000497960 RABGGTBP53611 331 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 SCRN1Q12765 414 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 TRAF7Q6Q0C0 670 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 ZNF577Q9BSK1 485 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 NKX2-4Q9H2Z4 354 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 SLC28A3Q9HAS3 691 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 TCEAL9Q9UHQ7 104 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 PCDHA11Q9Y5I1 949 aa17.41■□□□□ 0.38
NUP50-219ENST00000497960 IGLV3-22A0A075B6J6 115 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 ABHD14A-ACY1A0A1B0GW23 586 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 IPO5O00410 1097 aaKnown RBP17.4■□□□□ 0.38
NUP50-219ENST00000497960 PFKFB2O60825 505 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 EFCAB14O75071 495 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 CIITAP33076 1130 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms