RNA–Protein interactions for RNA: ENST00000497842.6

TTC19-208, Transcript of tetratricopeptide repeat domain 19, human

TSL 5

Gene TTC19, Length 1,360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC19-208	ENST00000497842	PRAMEF19	Q5SWL8	479 aa		32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	MIER3	Q7Z3K6	550 aa		32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	RDM1	Q8NG50	284 aa		32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	GPT2	Q8TD30	523 aa		32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	SNX29	Q8TEQ0	813 aa		32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	CALML4	Q96GE6	196 aa		32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	PYM1	Q9BRP8	204 aa	Known RBP	32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	MLXIP	Q9HAP2	919 aa		32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	TRIM17	Q9Y577	477 aa		32.04	■■■□□ 2.72
TTC19-208	ENST00000497842	WDR64	B1ANS9	1081 aa		32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	ADCYAP1R1	P41586	468 aa		32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	SYK	P43405	635 aa		32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	CCDC144B	Q3MJ40	725 aa		32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	CELF3	Q5SZQ8	465 aa	Known RBP	32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	DHX37	Q8IY37	1157 aa	Known RBP	32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	SMAP1	Q8IYB5	467 aa	Predicted RBP	32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	PXYLP1	Q8TE99	480 aa		32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	SAMM50	Q9Y512	469 aa		32.03	■■■□□ 2.72
TTC19-208	ENST00000497842	WDR81	Q562E7	1941 aa		32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	EML1	O00423	815 aa		32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	NKRF	O15226	690 aa	Known RBP eCLIP	32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	ZNF865	P0CJ78	1059 aa	Predicted RBP	32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	CCT6A	P40227	531 aa	Known RBP	32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	EPHA7	Q15375	998 aa		32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	METTL7B	Q6UX53	244 aa		32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	CDK5RAP3	Q96JB5	506 aa		32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	DISC1	Q9NRI5	854 aa		32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	KDM3A	Q9Y4C1	1321 aa		32.02	■■■□□ 2.72
TTC19-208	ENST00000497842	FARP2	O94887	1054 aa	Predicted RBP	32.01	■■■□□ 2.71
TTC19-208	ENST00000497842	NEK9	Q8TD19	979 aa		32.01	■■■□□ 2.71
TTC19-208	ENST00000497842	EIF2AK1	Q9BQI3	630 aa	Known RBP	32.01	■■■□□ 2.71
TTC19-208	ENST00000497842	MMTAG2	Q9BU76	263 aa	Known RBP	32.01	■■■□□ 2.71
TTC19-208	ENST00000497842	SORBS3	O60504	671 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	CCNE2	O96020	404 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	GH1	P01241	217 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	HMGCR	P04035	888 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	ELN	P15502	786 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	TNFAIP2	Q03169	654 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	ZRSR1	Q15695	479 aa	Known RBP	32	■■■□□ 2.71
TTC19-208	ENST00000497842	DUSP28	Q4G0W2	176 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	FMR1NB	Q8N0W7	255 aa	Predicted RBP	32	■■■□□ 2.71
TTC19-208	ENST00000497842	SLAIN1	Q8ND83	568 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	ENGASE	Q8NFI3	743 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	POLR3C	Q9BUI4	534 aa	Predicted RBP	32	■■■□□ 2.71
TTC19-208	ENST00000497842	BCAS3	Q9H6U6	928 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	FAM184B	Q9ULE4	1060 aa		32	■■■□□ 2.71
TTC19-208	ENST00000497842	POLR2D	O15514	142 aa	Known RBP	31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	TRAK2	O60296	914 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	NR1I2	O75469	434 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	RPA1	P27694	616 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	ACTR2	P61160	394 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	SP4	Q02446	784 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	LAMC2	Q13753	1193 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	KARS	Q15046	597 aa	Known RBP	31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	KLHL40	Q2TBA0	621 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	PDILT	Q8N807	584 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	PANK2	Q9BZ23	570 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	TUFT1	Q9NNX1	390 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	PCDHA10	Q9Y5I2	948 aa		31.99	■■■□□ 2.71
TTC19-208	ENST00000497842	KIN	O60870	393 aa	Known RBP	31.98	■■■□□ 2.71
TTC19-208	ENST00000497842	ZNF202	O95125	648 aa		31.98	■■■□□ 2.71
TTC19-208	ENST00000497842	PSAP	P07602	524 aa		31.98	■■■□□ 2.71
TTC19-208	ENST00000497842	RRAGB	Q5VZM2	374 aa		31.98	■■■□□ 2.71
TTC19-208	ENST00000497842	NT5C3A	Q9H0P0	336 aa		31.98	■■■□□ 2.71
TTC19-208	ENST00000497842	DACT1	Q9NYF0	836 aa		31.98	■■■□□ 2.71
TTC19-208	ENST00000497842	USP25	Q9UHP3	1055 aa		31.98	■■■□□ 2.71
TTC19-208	ENST00000497842	CYBA	P13498	195 aa		31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	SMPD1	P17405	629 aa		31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	SNW1	Q13573	536 aa	Known RBP	31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	HYI	Q5T013	277 aa		31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	MIS18BP1	Q6P0N0	1132 aa		31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	IQUB	Q8NA54	791 aa		31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	COPS5	Q92905	334 aa		31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	SPATA33	Q96N06	139 aa		31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	MYH9	P35579	1960 aa	Known RBP	31.97	■■■□□ 2.71
TTC19-208	ENST00000497842	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	31.96	■■■□□ 2.71
TTC19-208	ENST00000497842	NOP56	O00567	594 aa	Known RBP	31.96	■■■□□ 2.71
TTC19-208	ENST00000497842	AKR1A1	P14550	325 aa		31.96	■■■□□ 2.71
TTC19-208	ENST00000497842	MUT	P22033	750 aa		31.96	■■■□□ 2.71
TTC19-208	ENST00000497842	ARHGAP1	Q07960	439 aa		31.96	■■■□□ 2.71
TTC19-208	ENST00000497842	CACNB2	Q08289	660 aa	Predicted RBP	31.96	■■■□□ 2.71
TTC19-208	ENST00000497842	EMID1	Q96A84	441 aa	Predicted RBP	31.96	■■■□□ 2.71
TTC19-208	ENST00000497842	HSD17B14	Q9BPX1	270 aa		31.96	■■■□□ 2.71
TTC19-208	ENST00000497842	DDX19A	Q9NUU7	478 aa	Known RBP	31.96	■■■□□ 2.71
TTC19-208	ENST00000497842		A0A087X0B3	334 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	P4HB	P07237	508 aa	Known RBP	31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	PLCG1	P19174	1290 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	STAT6	P42226	847 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	GRB10	Q13322	594 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	TMEM63B	Q5T3F8	832 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	CATSPER3	Q86XQ3	398 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	DHX58	Q96C10	678 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	DYDC2	Q96IM9	177 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	RGL1	Q9NZL6	768 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	LOXHD1	Q8IVV2	1947 aa		31.95	■■■□□ 2.71
TTC19-208	ENST00000497842	MED24	O75448	989 aa		31.94	■■■□□ 2.7
TTC19-208	ENST00000497842	ATG7	O95352	703 aa		31.94	■■■□□ 2.7
TTC19-208	ENST00000497842	SUPT20HL2	P0C7V6	817 aa		31.94	■■■□□ 2.7
TTC19-208	ENST00000497842	CYP4A11	Q02928	519 aa		31.94	■■■□□ 2.7
TTC19-208	ENST00000497842	GJC2	Q5T442	439 aa	Predicted RBP	31.94	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms