RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 FANCIQ9NVI1 1328 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 DNM1LO00429 736 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 HOXA7P31268 230 aaPredicted RBP9.4□□□□□ -0.9
VPS45-210ENST00000497638 SOX4Q06945 474 aaPredicted RBP9.4□□□□□ -0.9
VPS45-210ENST00000497638 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 C9orf50Q5SZB4 431 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 MFSD14CQ5VZR4 134 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 CDPF1Q6NVV7 123 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
VPS45-210ENST00000497638 ANKRD44Q8N8A2 993 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 LIN7BQ9HAP6 207 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS45-210ENST00000497638 DDX4Q9NQI0 724 aaKnown RBP9.4□□□□□ -0.9
VPS45-210ENST00000497638 DENND2AQ9ULE3 1009 aa9.4□□□□□ -0.9
VPS45-210ENST00000497638 MYO9BQ13459 2157 aa9.4□□□□□ -0.91
VPS45-210ENST00000497638 NBPF7P0C2Y1 421 aaPredicted RBP9.39□□□□□ -0.91
VPS45-210ENST00000497638 HERVK_113P62684 666 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 PICALMQ13492 652 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 CCL14Q16627 93 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 SLC4A10Q6U841 1118 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 GPR142Q7Z601 462 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 PLEKHH3Q7Z736 793 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 DZIP1Q86YF9 867 aaKnown RBP9.39□□□□□ -0.91
VPS45-210ENST00000497638 USP38Q8NB14 1042 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 ATXN2LQ8WWM7 1075 aaKnown RBP9.39□□□□□ -0.91
VPS45-210ENST00000497638 LPAR1Q92633 364 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 CLEC4MQ9H2X3 399 aaPredicted RBP9.39□□□□□ -0.91
VPS45-210ENST00000497638 DDX20Q9UHI6 824 aaKnown RBP9.39□□□□□ -0.91
VPS45-210ENST00000497638 BRPF3Q9ULD4 1205 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 ATP11BQ9Y2G3 1177 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 RLFQ13129 1914 aa9.39□□□□□ -0.91
VPS45-210ENST00000497638 A0A1W2PP55 124 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 EYA2O00167 538 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 GLRX3O76003 335 aaKnown RBP9.38□□□□□ -0.91
VPS45-210ENST00000497638 CYP11A1P05108 521 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 CAP2P40123 477 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 BTDP43251 543 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 ERVK-24P63145 666 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 CCNJLQ8IV13 435 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 GALNT12Q8IXK2 581 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 C2CD4AQ8NCU7 369 aaPredicted RBP9.38□□□□□ -0.91
VPS45-210ENST00000497638 BADQ92934 168 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 TBC1D32Q96NH3 1257 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 P2RX7Q99572 595 aaKnown RBP9.38□□□□□ -0.91
VPS45-210ENST00000497638 WDR18Q9BV38 432 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 CWC22Q9HCG8 908 aaKnown RBP9.38□□□□□ -0.91
VPS45-210ENST00000497638 TXNRD2Q9NNW7 524 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
VPS45-210ENST00000497638 TMOD4Q9NZQ9 345 aa9.38□□□□□ -0.91
VPS45-210ENST00000497638 MROH7-TTC4A0A0A0MT08 1334 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 PDS5AQ29RF7 1337 aaKnown RBP9.37□□□□□ -0.91
VPS45-210ENST00000497638 MAP4K4O95819 1239 aaPredicted RBP9.37□□□□□ -0.91
VPS45-210ENST00000497638 NEFLP07196 543 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 MAOBP27338 520 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 GRIA4P48058 902 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 BACE1P56817 501 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 MAP3K12Q12852 859 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 SNX17Q15036 470 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 CPSF6Q16630 551 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS45-210ENST00000497638 ATP2B3Q16720 1220 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 SPRED3Q2MJR0 410 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 ARRDC4Q8NCT1 418 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 KLHDC4Q8TBB5 520 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 RNPC3Q96LT9 517 aaKnown RBP9.37□□□□□ -0.91
VPS45-210ENST00000497638 PORCNQ9H237 461 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 C1orf115Q9H7X2 142 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 PDLIM7Q9NR12 457 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 RAD18Q9NS91 495 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 THEGQ9P2T0 379 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 RBPJLQ9UBG7 517 aa9.37□□□□□ -0.91
VPS45-210ENST00000497638 HERC5Q9UII4 1024 aaKnown RBP9.37□□□□□ -0.91
VPS45-210ENST00000497638 SYNGAP1Q96PV0 1343 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 C19orf81C9J6K1 198 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 KBTBD13C9JR72 458 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 ICMTO60725 284 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 ASNSP08243 561 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 FOSL1P15407 271 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 CNGA1P29973 690 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 CCNA1P78396 465 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 EXOSC9Q06265 439 aaKnown RBP9.36□□□□□ -0.91
VPS45-210ENST00000497638 POU4F3Q15319 338 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 ZNF423Q2M1K9 1284 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 HP1BP3Q5SSJ5 553 aaPredicted RBP9.36□□□□□ -0.91
VPS45-210ENST00000497638 SPTY2D1Q68D10 685 aaPredicted RBP9.36□□□□□ -0.91
VPS45-210ENST00000497638 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 SLC39A5Q6ZMH5 540 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 GLYCTKQ8IVS8 523 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 SHISA5Q8N114 240 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 EDC3Q96F86 508 aaKnown RBP9.36□□□□□ -0.91
VPS45-210ENST00000497638 ASB2Q96Q27 587 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 PAGR1Q9BTK6 254 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 PRKRIP1Q9H875 184 aaPredicted RBP9.36□□□□□ -0.91
VPS45-210ENST00000497638 ZFYVE1Q9HBF4 777 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 RNF114Q9Y508 228 aa9.36□□□□□ -0.91
VPS45-210ENST00000497638 GPR75-ASB3A0A0A6YYF3 556 aa9.35□□□□□ -0.91
VPS45-210ENST00000497638 SLC15A5A6NIM6 579 aa9.35□□□□□ -0.91
VPS45-210ENST00000497638 H3BRB1 525 aa9.35□□□□□ -0.91
VPS45-210ENST00000497638 CYP26A1O43174 497 aa9.35□□□□□ -0.91
VPS45-210ENST00000497638 PEX10O60683 326 aa9.35□□□□□ -0.91
VPS45-210ENST00000497638 HOXC6P09630 235 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms