RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 LPXNO60711 386 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 CTSHP09668 335 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.51■□□□□ 0.23
CXCL12-208ENST00000496375 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 DBF4BQ8NFT6 615 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 GDPD5Q8WTR4 605 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 SETD4Q9NVD3 440 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
CXCL12-208ENST00000496375 SLC12A7Q9Y666 1083 aa16.51■□□□□ 0.23
CXCL12-208ENST00000496375 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 CAND2O75155 1236 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 SEC24BO95487 1268 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 GNAT1P11488 350 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 PSMA5P28066 241 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 RCAN1P53805 252 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 UBE2SQ16763 222 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 AAK1Q2M2I8 961 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 TMTC3Q6ZXV5 915 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 MYOCDQ8IZQ8 938 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
CXCL12-208ENST00000496375 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 MTUS1Q9ULD2 1270 aa16.5■□□□□ 0.23
CXCL12-208ENST00000496375 NCOR1O75376 2440 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 ATP9AO75110 1047 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 AMHP03971 560 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 BMP1P13497 986 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 ITGB5P18084 799 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 RPS6KB1P23443 525 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 ARHGAP4P98171 946 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
CXCL12-208ENST00000496375 PLEKHG4Q58EX7 1191 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 FANCBQ8NB91 859 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 GIMAP8Q8ND71 665 aaPredicted RBP16.49■□□□□ 0.23
CXCL12-208ENST00000496375 SEPT8Q92599 483 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 KAT6AQ92794 2004 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 GPRASP2Q96D09 838 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 TGS1Q96RS0 853 aaKnown RBP16.49■□□□□ 0.23
CXCL12-208ENST00000496375 INSL6Q9Y581 213 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 SIP14410 1827 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 NID2Q14112 1375 aa16.49■□□□□ 0.23
CXCL12-208ENST00000496375 SPDYE3A6NKU9 549 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 KCNA2P16389 499 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 TCF7P36402 384 aaPredicted RBP16.48■□□□□ 0.23
CXCL12-208ENST00000496375 KCNQ1P51787 676 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 ERVK-21P61565 698 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 ADAM17P78536 824 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 HEATR3Q7Z4Q2 680 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 LMBR1Q8WVP7 490 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 OSBPL7Q9BZF2 842 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 SUGCTQ9HAC7 445 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 COG5Q9UP83 839 aa16.48■□□□□ 0.23
CXCL12-208ENST00000496375 EVCP57679 992 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 NECAB3Q96P71 396 aaPredicted RBP16.47■□□□□ 0.23
CXCL12-208ENST00000496375 LMCD1Q9NZU5 365 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 PKD2L1Q9P0L9 805 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 PCDHA6Q9UN73 950 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 PCDHA8Q9Y5H6 950 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 UBIAD1Q9Y5Z9 338 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 BDP1A6H8Y1 2624 aa16.47■□□□□ 0.23
CXCL12-208ENST00000496375 NRCAMQ92823 1304 aa16.46■□□□□ 0.23
CXCL12-208ENST00000496375 GSTTP1A0A1W2PQM5 241 aa16.46■□□□□ 0.23
CXCL12-208ENST00000496375 HTRA4P83105 476 aaPredicted RBP16.46■□□□□ 0.23
CXCL12-208ENST00000496375 MTMR1Q13613 665 aa16.46■□□□□ 0.23
CXCL12-208ENST00000496375 SEPT1Q8WYJ6 367 aa16.46■□□□□ 0.23
CXCL12-208ENST00000496375 HLA-CQ95604 372 aa16.46■□□□□ 0.23
CXCL12-208ENST00000496375 CNTNAP5Q8WYK1 1306 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.45■□□□□ 0.22
CXCL12-208ENST00000496375 CPA1P15085 419 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 MARK3P27448 753 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 PPFIA1Q13136 1202 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 FAM26DQ5JW98 314 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 WWC2Q6AWC2 1192 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 RUFY4Q6ZNE9 571 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 FBXO22Q8NEZ5 403 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
CXCL12-208ENST00000496375 TOP1MTQ969P6 601 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 TCEANC2Q96MN5 208 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 C17orf80Q9BSJ5 609 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 EHMT1Q9H9B1 1298 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 JADE2Q9NQC1 790 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 RBM28Q9NW13 759 aaKnown RBP16.45■□□□□ 0.22
CXCL12-208ENST00000496375 ERAP1Q9NZ08 941 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 CYP46A1Q9Y6A2 500 aa16.45■□□□□ 0.22
CXCL12-208ENST00000496375 UPP2O95045 317 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 NAPAP54920 295 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 RTN1Q16799 776 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 TYW1BQ6NUM6 668 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 Q6ZUG5 572 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 APBB2Q92870 758 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 GLG1Q92896 1179 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 YME1L1Q96TA2 773 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 IFIH1Q9BYX4 1025 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms