RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 CALML3P27482 149 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 SLC1A4P43007 532 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 MRPL12P52815 198 aaKnown RBP11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 CAMK1Q14012 370 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 AMHR2Q16671 573 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 KIAA0753Q2KHM9 967 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 CTR9Q6PD62 1173 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 CHST3Q7LGC8 479 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 CCDC105Q8IYK2 499 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 STK11IPQ8N1F8 1099 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 FLCNQ8NFG4 579 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 RUBCNQ92622 972 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 APBB2Q92870 758 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 P2RX5Q93086 422 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 MKL1Q969V6 931 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 DNAJC2Q99543 621 aaKnown RBP11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 TLE6Q9H808 572 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 GOLIM4O00461 696 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 ARIH2O95376 493 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 SNAP25P60880 206 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 KCNA1Q09470 495 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 NAALADL2Q58DX5 795 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 CEP95Q96GE4 821 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 ZNF287Q9HBT7 754 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 MTMR4Q9NYA4 1195 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 RALYQ9UKM9 306 aaKnown RBP11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 SLC4A4Q9Y6R1 1079 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 MYH4Q9Y623 1939 aa11.36□□□□□ -0.59
SMARCAL1-213ENST00000496037 ZBED9Q6R2W3 1325 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 MAP1BP46821 2468 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 IGKV6D-41A0A0C4DH26 115 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 NFIBO00712 420 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 F2P00734 622 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 ICAM1P05362 532 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 AOC1P19801 751 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 ZNF200P98182 395 aaPredicted RBP11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 CWF19L1Q69YN2 538 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 ZC3H14Q6PJT7 736 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 SLC30A10Q6XR72 485 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 RNF207Q6ZRF8 634 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 AACSQ86V21 672 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 SERINC5Q86VE9 423 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 ZNF444Q8N0Y2 327 aaPredicted RBP11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 POF1BQ8WVV4 589 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 CHMP4CQ96CF2 233 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 GMCL1Q96IK5 515 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 PRR12Q9ULL5 1215 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 CEP250Q9BV73 2442 aa11.35□□□□□ -0.59
SMARCAL1-213ENST00000496037 USP24Q9UPU5 2620 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 PLA2G6O60733 806 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 CAND2O75155 1236 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 ITGB1P05556 798 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 CTSHP09668 335 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 ZNF286BP0CG31 522 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 EDNRBP24530 442 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 DNAJB1P25685 340 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 ARHGAP1Q07960 439 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 KCTD1Q719H9 257 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 DTWD2Q8NBA8 298 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 DNERQ8NFT8 737 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 SPPL3Q8TCT6 385 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 MICAL1Q8TDZ2 1067 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 RTP3Q9BQQ7 232 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 RC3H2Q9HBD1 1191 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 R4GN57 208 aa11.34□□□□□ -0.59
SMARCAL1-213ENST00000496037 PER2O15055 1255 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 MCCP23508 829 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 ADD2P35612 726 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 LY6KQ17RY6 165 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 CCDC62Q6P9F0 684 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 KLHL23Q8NBE8 558 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 SSH3Q8TE77 659 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 ATP6V0A1Q93050 837 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 CDCA3Q99618 268 aaPredicted RBP11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 SMOC2Q9H3U7 446 aa11.33□□□□□ -0.6
SMARCAL1-213ENST00000496037 C17orf102A2RUQ5 167 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 MINDY4BA8MYZ0 360 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 HAS3O00219 553 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 PRDM1O75626 825 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 BCAR3O75815 825 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 TSPY3P0CV98 308 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 TSPY8P0CW00 308 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 MLLT3P42568 568 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 TECP42680 631 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 ATXN1P54253 815 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 RBM10P98175 930 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 DMWDQ09019 674 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 SLFNL1Q499Z3 407 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 DCLK2Q8N568 766 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 ATP8B4Q8TF62 1192 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 APOL5Q9BWW9 433 aa11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 CDV3Q9UKY7 258 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 MRPL42Q9Y6G3 142 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-213ENST00000496037 PLIN4Q96Q06 1357 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 ASPMQ8IZT6 3477 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms