RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.34□□□□□ -0.434e-17■■□□□ 14.2
TBRG4-217ENST00000495973 WDR18Q9BV38 432 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 MRIQ9BWK5 157 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 LSM14BQ9BX40 385 aaKnown RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 RAVER2Q9HCJ3 691 aaKnown RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 GAS7O60861 476 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 VIL1P09327 827 aaKnown RBP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 NR2F2P24468 414 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 ARHGAP25P42331 645 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 CHMP4BP1P59074 171 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 HERVK_113P62684 666 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 ORC2Q13416 577 aaPredicted RBP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 MAN2A1Q16706 1144 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 NEK11Q8NG66 645 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 SCFD1Q8WVM8 642 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 LENG9Q96B70 501 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 HOOK2Q96ED9 719 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 NAPGQ99747 312 aaPredicted RBP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 CNTNAP1P78357 1384 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 ARP10275 920 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 POLR2FP61218 127 aaKnown RBP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 RASSF7Q02833 373 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 LRRC27Q9C0I9 530 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 GLT8D2Q9H1C3 349 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 ZNF446Q9NWS9 450 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 TMX2Q9Y320 296 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 FOCADQ5VW36 1801 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 NFIBO00712 420 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 SPATA31C1P0DKV0 1188 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 MYCLP12524 364 aaPredicted RBP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 ACTN1P12814 892 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 POLD1P28340 1107 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 FKBP1AP62942 108 aaKnown RBP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 RAPGEF1Q13905 1077 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 SPA17Q15506 151 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 ZC2HC1CQ53FD0 456 aaPredicted RBP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 LRRC55Q6ZSA7 311 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 MYCT1Q8N699 235 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 CAGE1Q8TC20 777 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 MYOZ2Q9NPC6 264 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 JADE2Q9NQC1 790 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 PIM2Q9P1W9 311 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.33□□□□□ -0.44
TBRG4-217ENST00000495973 COL4A3BPQ9Y5P4 624 aa12.33□□□□□ -0.44
TBRG4-217ENST00000495973 A0A1W2PQC6 194 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 NMT1P30419 496 aaKnown RBP12.32□□□□□ -0.44
TBRG4-217ENST00000495973 CYLC1P35663 651 aaPredicted RBP12.32□□□□□ -0.44
TBRG4-217ENST00000495973 SREBF1P36956 1147 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 ZBED6P86452 979 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 FKBP3Q00688 224 aaKnown RBP12.32□□□□□ -0.44
TBRG4-217ENST00000495973 TMCO3Q6UWJ1 677 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 NSMFQ6X4W1 530 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 ZNF577Q9BSK1 485 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 MLXIPQ9HAP2 919 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 COL4A5P29400 1685 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 PCNTO95613 3336 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 FLOT1O75955 427 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 FGFR1OPO95684 399 aaKnown RBP12.32□□□□□ -0.44
TBRG4-217ENST00000495973 EIF2AK2P19525 551 aaKnown RBP12.32□□□□□ -0.44
TBRG4-217ENST00000495973 CAP2P40123 477 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 MATR3P43243 847 aaKnown RBP eCLIP12.32□□□□□ -0.44
TBRG4-217ENST00000495973 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 DNAJC7Q99615 494 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 TAOK3Q9H2K8 898 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 PLEKHA4Q9H4M7 779 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 OGFRQ9NZT2 677 aa12.32□□□□□ -0.44
TBRG4-217ENST00000495973 TMEM150BA6NC51 233 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 BUB1O43683 1085 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 FAM13AO94988 1023 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 FOSP01100 380 aaPredicted RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 GOLGA1Q92805 767 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 SIPA1L1O43166 1804 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 ZNF185O15231 689 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 TUBB4AP04350 444 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 CXCR5P32302 372 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 SLC12A3P55017 1021 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 LRRC63Q05C16 580 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 SPIRE1Q08AE8 756 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 GIT2Q14161 759 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 ARGLU1Q9NWB6 273 aaPredicted RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 POLR3GO15318 223 aaPredicted RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 ZMYND10O75800 440 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 KCTD19Q17RG1 926 aaPredicted RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 DLK2Q6UY11 383 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 IL31RAQ8NI17 732 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 GDAP1L1Q96MZ0 367 aa12.31□□□□□ -0.44
TBRG4-217ENST00000495973 GMLQ99445 158 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms