RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 WTIPA6NIX2 430 aaPredicted RBP5.38□□□□□ -1.55
CMSS1-207ENST00000494412 H7BY64 318 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 HIP1RO75146 1068 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 AMY2AP04746 511 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 IFIT2P09913 472 aaKnown RBP5.38□□□□□ -1.55
CMSS1-207ENST00000494412 ZBTB48P10074 688 aaPredicted RBP5.38□□□□□ -1.55
CMSS1-207ENST00000494412 AMY2BP19961 511 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 LPOP22079 712 aaPredicted RBP5.38□□□□□ -1.55
CMSS1-207ENST00000494412 FPR2P25090 351 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 RPL10P27635 214 aaKnown RBP5.38□□□□□ -1.55
CMSS1-207ENST00000494412 PDE6BP35913 854 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 KIF11P52732 1056 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 HTRA3P83110 453 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 SPIRE1Q08AE8 756 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 GTF2H3Q13889 308 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 GAB4Q2WGN9 574 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 IL31Q6EBC2 164 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 FSTL4Q6MZW2 842 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 EPM2AIP1Q7L775 607 aaPredicted RBP5.38□□□□□ -1.55
CMSS1-207ENST00000494412 DTX1Q86Y01 620 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 CREG2Q8IUH2 290 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 TEX2Q8IWB9 1127 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 TGFBRAP1Q8WUH2 860 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 DPF3Q92784 378 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 TRMT2BQ96GJ1 504 aaKnown RBP5.38□□□□□ -1.55
CMSS1-207ENST00000494412 MARCH2Q9P0N8 246 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 SAP30BPQ9UHR5 308 aaKnown RBP5.38□□□□□ -1.55
CMSS1-207ENST00000494412 PLAGL2Q9UPG8 496 aa5.38□□□□□ -1.55
CMSS1-207ENST00000494412 TMEM82A0PJX8 343 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 LCHNA4D1U4 455 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 SCDO00767 359 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 DVL2O14641 736 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 ERC2O15083 957 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 TRIM27P14373 513 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 VCAM1P19320 739 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 NEK3P51956 506 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 PHC1P78364 1004 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 KRT85P78386 507 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 SMAD3P84022 425 aaKnown RBP5.37□□□□□ -1.55
CMSS1-207ENST00000494412 GRM3Q14832 879 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 SMAD2Q15796 467 aaKnown RBP5.37□□□□□ -1.55
CMSS1-207ENST00000494412 CPZQ66K79 652 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 HHIPL2Q6UWX4 724 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 NFXL1Q6ZNB6 911 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 SPACA3Q8IXA5 215 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 ZNF610Q8N9Z0 462 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 LMBR1Q8WVP7 490 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 AIFM3Q96NN9 605 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 ARPC5LQ9BPX5 153 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 SARGQ9BW04 601 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 ZDHHC5Q9C0B5 715 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 SP110Q9HB58 689 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 CCM2LQ9NUG4 571 aaPredicted RBP5.37□□□□□ -1.55
CMSS1-207ENST00000494412 ERVK13-1Q9NX77 482 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 GULP1Q9UBP9 304 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 DDX20Q9UHI6 824 aaKnown RBP5.37□□□□□ -1.55
CMSS1-207ENST00000494412 USP25Q9UHP3 1055 aa5.37□□□□□ -1.55
CMSS1-207ENST00000494412 TCRBV5S4A2TA0A5A2 114 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 TRIM75PA6NK02 468 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 NKRFO15226 690 aaKnown RBP eCLIP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 KDM1AO60341 852 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 CEACAM5P06731 702 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 ASGR2P07307 311 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 HSPA6P17066 643 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 CD96P40200 585 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 GPR3P46089 330 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 CLCN7P51798 805 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 EGR3Q06889 387 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 BNIP3Q12983 259 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 PICALMQ13492 652 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 GBX1Q14549 363 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 VPS72Q15906 364 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 C10orf62Q5T681 223 aaPredicted RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 IFIT1BQ5T764 474 aaKnown RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 ANGEL2Q5VTE6 544 aaKnown RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 HLA-DQA1Q5Y7H0 255 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 TTLL7Q6ZT98 887 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 THAP5Q7Z6K1 395 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 NOSTRINQ8IVI9 506 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 FAM9AQ8IZU1 332 aaPredicted RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 PJA1Q8NG27 643 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 NETO1Q8TDF5 533 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 IL17RAQ96F46 866 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 FCRL2Q96LA5 508 aaPredicted RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 TEKT5Q96M29 485 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 NUP88Q99567 741 aaPredicted RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 EPB41L1Q9H4G0 881 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 NMRK2Q9NPI5 230 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 BSDC1Q9NW68 430 aaPredicted RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 CCDC39Q9UFE4 941 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 ADGRE2Q9UHX3 823 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 FAM50BQ9Y247 325 aa5.36□□□□□ -1.55
CMSS1-207ENST00000494412 COA3Q9Y2R0 106 aaPredicted RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 FRMPD2Q68DX3 1309 aaPredicted RBP5.36□□□□□ -1.55
CMSS1-207ENST00000494412 C22orf46C9J442 243 aa5.35□□□□□ -1.55
CMSS1-207ENST00000494412 MAN2B1O00754 1011 aa5.35□□□□□ -1.55
CMSS1-207ENST00000494412 ZRANB2O95218 330 aaKnown RBP eCLIP5.35□□□□□ -1.55
CMSS1-207ENST00000494412 FUCA1P04066 466 aa5.35□□□□□ -1.55
CMSS1-207ENST00000494412 CD40P25942 277 aa5.35□□□□□ -1.55
CMSS1-207ENST00000494412 PTX3P26022 381 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms