RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TNNC1P63316 161 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 ZNF543Q08ER8 600 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 PAK2Q13177 524 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 ZCWPW2Q504Y3 356 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 EAPPQ56P03 285 aaPredicted RBP12.66□□□□□ -0.38
RFC4-214ENST00000494047 C8orf74Q6P047 294 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 AENQ8WTP8 325 aaKnown RBP12.66□□□□□ -0.38
RFC4-214ENST00000494047 LMBR1Q8WVP7 490 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 DDX12PQ92771 950 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 VTI1AQ96AJ9 217 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 MTMR8Q96EF0 704 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 OSBPL9Q96SU4 736 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 MRIQ9BWK5 157 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 SEMA6BQ9H3T3 888 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 MMRN2Q9H8L6 949 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 PLCB1Q9NQ66 1216 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 AGPAT5Q9NUQ2 364 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 SERPINB13Q9UIV8 391 aa12.66□□□□□ -0.38
RFC4-214ENST00000494047 UBE4BO95155 1302 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 MYMKA6NI61 221 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 SMIM22K7EJ46 135 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 RNF225M0QZC1 329 aaPredicted RBP12.65□□□□□ -0.38
RFC4-214ENST00000494047 CETN3O15182 167 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
RFC4-214ENST00000494047 HSF2BPO75031 334 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 PPFIA4O75335 1185 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 RAD17O75943 681 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 CCDC172P0C7W6 258 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
RFC4-214ENST00000494047 MMP14P50281 582 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 FKBP1AP62942 108 aaKnown RBP12.65□□□□□ -0.38
RFC4-214ENST00000494047 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 HHIPL2Q6UWX4 724 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 STXBP4Q6ZWJ1 553 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 FRMD5Q7Z6J6 570 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 MREGQ8N565 214 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 WHAMMQ8TF30 809 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 ZC3H15Q8WU90 426 aaKnown RBP12.65□□□□□ -0.38
RFC4-214ENST00000494047 MMS19Q96T76 1030 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 FAM204AQ9H8W3 233 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 DBNDD1Q9H9R9 158 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 INTUQ9ULD6 942 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
RFC4-214ENST00000494047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.65□□□□□ -0.38
RFC4-214ENST00000494047 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 COL2A1P02458 1487 aaPredicted RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 MYH4Q9Y623 1939 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 PSME4Q14997 1843 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 MACROD2A1Z1Q3 448 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 FRMD3A2A2Y4 597 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 GTPBP10A4D1E9 387 aaKnown RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 CALUO43852 315 aaPredicted RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 SHOX2O60902 331 aaPredicted RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 VIL1P09327 827 aaKnown RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 FCER1AP12319 257 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 RFX1P22670 979 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 GMPSP49915 693 aaPredicted RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 RAD51AP2Q09MP3 1159 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 COASYQ13057 564 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 SLC18A3Q16572 532 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 SLC35G1Q2M3R5 365 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 TDRD12Q587J7 1177 aaKnown RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 USP17L2Q6R6M4 530 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 RRAGAQ7L523 313 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 TXNRD3Q86VQ6 643 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 CREG2Q8IUH2 290 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 SYCE1Q8N0S2 351 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 AGBL3Q8NEM8 1001 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 SPATA4Q8NEY3 305 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 BAP1Q92560 729 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 FAM20AQ96MK3 541 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 MBOAT7Q96N66 472 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 TANGO6Q9C0B7 1094 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 RASSF4Q9H2L5 321 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 SLC39A2Q9NP94 309 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 PANK4Q9NVE7 773 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 AIPL1Q9NZN9 384 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 ARHGAP20Q9P2F6 1191 aa12.64□□□□□ -0.39
RFC4-214ENST00000494047 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
RFC4-214ENST00000494047 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 GOLGA6CA6NDK9 693 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 LRRC53A6NM62 1247 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 ZEB2O60315 1214 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 FLOT1O75955 427 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 GOLGA6DP0CG33 693 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 GAP43P17677 238 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 EIF4A3P38919 411 aaKnown RBP12.63□□□□□ -0.39
RFC4-214ENST00000494047 TNNI2P48788 182 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
RFC4-214ENST00000494047 NFIL3Q16649 462 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 ASTE1Q2TB18 679 aaPredicted RBP12.63□□□□□ -0.39
RFC4-214ENST00000494047 SRLQ86TD4 932 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 TRIM59Q8IWR1 403 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms