RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 IGFALSP35858 605 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 ST5P78524 1137 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 FBLN7Q53RD9 439 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 ABHD17CQ6PCB6 329 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 OTOP1Q7RTM1 612 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 KIAA0907Q7Z7F0 614 aaPredicted RBP6.41□□□□□ -1.38
ITGB1-216ENST00000493758 NOSTRINQ8IVI9 506 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 MARCH10Q8NA82 808 aaPredicted RBP6.41□□□□□ -1.38
ITGB1-216ENST00000493758 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 ORAI3Q9BRQ5 295 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 DLL4Q9NR61 685 aa6.41□□□□□ -1.38
ITGB1-216ENST00000493758 ZNF28P17035 718 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 PTPN1P18031 435 aaKnown RBP6.4□□□□□ -1.38
ITGB1-216ENST00000493758 MECP2P51608 486 aaKnown RBP6.4□□□□□ -1.38
ITGB1-216ENST00000493758 HERVK_113P62684 666 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 FAM26FQ5R3K3 315 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 CD276Q5ZPR3 534 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 ZCCHC8Q6NZY4 707 aaKnown RBP6.4□□□□□ -1.38
ITGB1-216ENST00000493758 OVCH1Q7RTY7 1134 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 CARFQ8N187 725 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 FEZ1Q99689 392 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 CD244Q9BZW8 370 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 CATSPERZQ9NTU4 200 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 MAGEC2Q9UBF1 373 aaPredicted RBP6.4□□□□□ -1.38
ITGB1-216ENST00000493758 WASF3Q9UPY6 502 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 PLAAQ9Y263 795 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 MRPL42Q9Y6G3 142 aaKnown RBP6.4□□□□□ -1.38
ITGB1-216ENST00000493758 ATP23Q9Y6H3 246 aa6.4□□□□□ -1.38
ITGB1-216ENST00000493758 ACOT7O00154 380 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 SMARCA5O60264 1052 aaPredicted RBP6.39□□□□□ -1.39
ITGB1-216ENST00000493758 CDC45O75419 566 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 ASMTLO95671 621 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 LTFP02788 710 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 POU3F2P20265 443 aaPredicted RBP6.39□□□□□ -1.39
ITGB1-216ENST00000493758 SLURP1P55000 103 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 JAM2P57087 298 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 PABPC4Q13310 644 aaKnown RBP eCLIP6.39□□□□□ -1.39
ITGB1-216ENST00000493758 TMEM177Q53S58 311 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 VASNQ6EMK4 673 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 TTLL10Q6ZVT0 673 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 PTRH1Q86Y79 214 aaKnown RBP6.39□□□□□ -1.39
ITGB1-216ENST00000493758 ZNF526Q8TF50 670 aaPredicted RBP6.39□□□□□ -1.39
ITGB1-216ENST00000493758 CLIC6Q96NY7 704 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 FANCLQ9NW38 375 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 USP35Q9P2H5 1018 aa6.39□□□□□ -1.39
ITGB1-216ENST00000493758 ZNF839A8K0R7 811 aa6.38□□□□□ -1.39
ITGB1-216ENST00000493758 PPP1R12AO14974 1030 aaPredicted RBP6.38□□□□□ -1.39
ITGB1-216ENST00000493758 SRGAP2CP0DJJ0 459 aa6.38□□□□□ -1.39
ITGB1-216ENST00000493758 RANGAP1P46060 587 aaPredicted RBP6.38□□□□□ -1.39
ITGB1-216ENST00000493758 RTP5Q14D33 572 aa6.38□□□□□ -1.39
ITGB1-216ENST00000493758 PLEKHG4Q58EX7 1191 aa6.38□□□□□ -1.39
ITGB1-216ENST00000493758 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
ITGB1-216ENST00000493758 DDX53Q86TM3 631 aaKnown RBP6.38□□□□□ -1.39
ITGB1-216ENST00000493758 PARD6AQ9NPB6 346 aa6.38□□□□□ -1.39
ITGB1-216ENST00000493758 COQ6Q9Y2Z9 468 aa6.38□□□□□ -1.39
ITGB1-216ENST00000493758 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 FAM90A27PA6NNH2 459 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 C4BPAP04003 597 aaKnown RBP6.37□□□□□ -1.39
ITGB1-216ENST00000493758 COL6A1P12109 1028 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 AOAHP28039 575 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 DBPQ10586 325 aaPredicted RBP6.37□□□□□ -1.39
ITGB1-216ENST00000493758 SMAD4Q13485 552 aaKnown RBP6.37□□□□□ -1.39
ITGB1-216ENST00000493758 OSTM1Q86WC4 334 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 CISD2Q8N5K1 135 aaKnown RBP6.37□□□□□ -1.39
ITGB1-216ENST00000493758 DLG3Q92796 817 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 NINJ1Q92982 152 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 XYLT2Q9H1B5 865 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 RTEL1Q9NZ71 1219 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 B3GALT1Q9Y5Z6 326 aa6.37□□□□□ -1.39
ITGB1-216ENST00000493758 SASH1O94885 1247 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 SDHAP31040 664 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 SARSP49591 514 aaKnown RBP6.36□□□□□ -1.39
ITGB1-216ENST00000493758 DNM2P50570 870 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 GRIN1Q05586 938 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 ARHGAP44Q17R89 818 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 TKFCQ3LXA3 575 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 ZNF761Q86XN6 746 aaPredicted RBP6.36□□□□□ -1.39
ITGB1-216ENST00000493758 RBM12BQ8IXT5 1001 aaKnown RBP6.36□□□□□ -1.39
ITGB1-216ENST00000493758 IGSF22Q8N9C0 903 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 CHST14Q8NCH0 376 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 IGDCC4Q8TDY8 1250 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 ADAMTS17Q8TE56 1095 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 SYT3Q9BQG1 590 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 BOCQ9BWV1 1114 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 KCNH7Q9NS40 1196 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 CD2APQ9Y5K6 639 aa6.36□□□□□ -1.39
ITGB1-216ENST00000493758 TNPO3Q9Y5L0 923 aaKnown RBP6.36□□□□□ -1.39
ITGB1-216ENST00000493758 SLC12A8A0AV02 714 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 FAM83GA6ND36 823 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 MAFO75444 373 aaPredicted RBP6.35□□□□□ -1.39
ITGB1-216ENST00000493758 GLRX3O76003 335 aaKnown RBP6.35□□□□□ -1.39
ITGB1-216ENST00000493758 ENO2P09104 434 aaPredicted RBP6.35□□□□□ -1.39
ITGB1-216ENST00000493758 SDSP20132 328 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 FLT3P36888 993 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 ZNF460Q14592 562 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 SKIDA1Q1XH10 827 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 BTBD8Q5XKL5 378 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 FRMD5Q7Z6J6 570 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms