RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 VPS16Q9H269 839 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 TAB2Q9NYJ8 693 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 SNCAIPQ9Y6H5 919 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 AKR1B15C9JRZ8 316 aaPredicted RBP15.61■□□□□ 0.09
PTPN7-216ENST00000492977 SLITRK3O94933 977 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 KRT18P05783 430 aaKnown RBP15.61■□□□□ 0.09
PTPN7-216ENST00000492977 TPM2P07951 284 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 CYP4A11Q02928 519 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 PABPC4Q13310 644 aaKnown RBP eCLIP15.61■□□□□ 0.09
PTPN7-216ENST00000492977 PRKG1Q13976 671 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 VGLL4Q14135 290 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 PTPN21Q16825 1174 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 USP50Q70EL3 339 aaPredicted RBP15.61■□□□□ 0.09
PTPN7-216ENST00000492977 CREBRFQ8IUR6 639 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 TC2NQ8N9U0 490 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 NEK9Q8TD19 979 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 ZC3H15Q8WU90 426 aaKnown RBP15.61■□□□□ 0.09
PTPN7-216ENST00000492977 PANX2Q96RD6 677 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 TAAR1Q96RJ0 339 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 JADE2Q9NQC1 790 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 KCNH7Q9NS40 1196 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 RNF146Q9NTX7 359 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 RGL1Q9NZL6 768 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 PCDHA2Q9Y5H9 948 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 CSADQ9Y600 493 aa15.61■□□□□ 0.09
PTPN7-216ENST00000492977 LGALS16A8MUM7 142 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 STX10O60499 249 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 TPM1P09493 284 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 IREB2P48200 963 aaKnown RBP15.6■□□□□ 0.09
PTPN7-216ENST00000492977 TRIM14Q14142 442 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 GIT2Q14161 759 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 PGM5Q15124 567 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 HERC4Q5GLZ8 1057 aaPredicted RBP15.6■□□□□ 0.09
PTPN7-216ENST00000492977 CCAR2Q8N163 923 aaKnown RBP15.6■□□□□ 0.09
PTPN7-216ENST00000492977 DYDC2Q96IM9 177 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 WNK4Q96J92 1243 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 TSG101Q99816 390 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
PTPN7-216ENST00000492977 UNC45AQ9H3U1 944 aa15.6■□□□□ 0.09
PTPN7-216ENST00000492977 ZNF214Q9UL59 606 aaPredicted RBP15.6■□□□□ 0.09
PTPN7-216ENST00000492977 COL11A1P12107 1806 aaPredicted RBP15.6■□□□□ 0.09
PTPN7-216ENST00000492977 NPHP3-ACAD11A0A0J9YXS1 232 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 A0A1W2PQC6 194 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 ADM5C9JUS6 153 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 ARHGAP6O43182 974 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 CCP110O43303 1012 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 DNM2P50570 870 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 MRPS9P82933 396 aaKnown RBP15.59■□□□□ 0.09
PTPN7-216ENST00000492977 UBXN1Q04323 297 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 TMEM132BQ14DG7 1078 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 SNRNP48Q6IEG0 339 aaKnown RBP15.59■□□□□ 0.09
PTPN7-216ENST00000492977 NSMFQ6X4W1 530 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 SLC30A10Q6XR72 485 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 TPH2Q8IWU9 490 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 IL31RAQ8NI17 732 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 NACC1Q96RE7 527 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 RMDN3Q96TC7 470 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 BAG1Q99933 345 aaPredicted RBP15.59■□□□□ 0.09
PTPN7-216ENST00000492977 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 TEX13BQ9BXU2 312 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 BHMT2Q9H2M3 363 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 AGO4Q9HCK5 861 aaKnown RBP15.59■□□□□ 0.09
PTPN7-216ENST00000492977 PXMP2Q9NR77 195 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 RIPK3Q9Y572 518 aa15.59■□□□□ 0.09
PTPN7-216ENST00000492977 CHMP2AO43633 222 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.09
PTPN7-216ENST00000492977 NF2P35240 595 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 ADKP55263 362 aaKnown RBP15.58■□□□□ 0.09
PTPN7-216ENST00000492977 RBL2Q08999 1139 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 BAATQ14032 418 aaPredicted RBP15.58■□□□□ 0.09
PTPN7-216ENST00000492977 CTTNQ14247 550 aaKnown RBP15.58■□□□□ 0.09
PTPN7-216ENST00000492977 ARHGEF16Q5VV41 709 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 TMEM139Q8IV31 216 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 CNGA4Q8IV77 575 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 MB21D1Q8N884 522 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 ZNF507Q8TCN5 953 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 CCDC51Q96ER9 411 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 CNOT6LQ96LI5 555 aaKnown RBP15.58■□□□□ 0.09
PTPN7-216ENST00000492977 PDCD2LQ9BRP1 358 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 NAA15Q9BXJ9 866 aaKnown RBP15.58■□□□□ 0.09
PTPN7-216ENST00000492977 TBC1D22BQ9NU19 505 aa15.58■□□□□ 0.09
PTPN7-216ENST00000492977 R3HCC1Q9Y3T6 440 aaKnown RBP15.58■□□□□ 0.09
PTPN7-216ENST00000492977 WDR90Q96KV7 1748 aa15.58■□□□□ 0.08
PTPN7-216ENST00000492977 PAPPA2Q9BXP8 1791 aa15.58■□□□□ 0.08
PTPN7-216ENST00000492977 SPDYE16A6NNV3 312 aaPredicted RBP15.58■□□□□ 0.08
PTPN7-216ENST00000492977 DHX15O43143 795 aaKnown RBP15.58■□□□□ 0.08
PTPN7-216ENST00000492977 MTIF2P46199 727 aaKnown RBP15.58■□□□□ 0.08
PTPN7-216ENST00000492977 MTMR1Q13613 665 aa15.58■□□□□ 0.08
PTPN7-216ENST00000492977 LRRC41Q15345 812 aa15.58■□□□□ 0.08
PTPN7-216ENST00000492977 E4F1Q66K89 784 aaPredicted RBP15.58■□□□□ 0.08
PTPN7-216ENST00000492977 REEP2Q9BRK0 252 aa15.58■□□□□ 0.08
PTPN7-216ENST00000492977 KCND2Q9NZV8 630 aa15.58■□□□□ 0.08
PTPN7-216ENST00000492977 COL4A3BPQ9Y5P4 624 aa15.58■□□□□ 0.08
PTPN7-216ENST00000492977 ZC3H4Q9UPT8 1303 aaKnown RBP15.57■□□□□ 0.08
PTPN7-216ENST00000492977 MAFGO15525 162 aa15.57■□□□□ 0.08
PTPN7-216ENST00000492977 MFAP3LO75121 409 aa15.57■□□□□ 0.08
PTPN7-216ENST00000492977 GAP43P17677 238 aa15.57■□□□□ 0.08
PTPN7-216ENST00000492977 CCND2P30279 289 aa15.57■□□□□ 0.08
PTPN7-216ENST00000492977 EPHX2P34913 555 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms