RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 TMEM265A0A087WTH1 108 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 SNAP23O00161 211 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 CIAO1O76071 339 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 WNT11O96014 354 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 CYP7A1P22680 504 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 COL9A2Q14055 689 aaPredicted RBP8.42□□□□□ -1.06
TPR-208ENST00000492973 ARSHQ5FYA8 562 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 CENPQQ7L2Z9 268 aaPredicted RBP8.42□□□□□ -1.06
TPR-208ENST00000492973 VGLL2Q8N8G2 317 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 BAHD1Q8TBE0 780 aaPredicted RBP8.42□□□□□ -1.06
TPR-208ENST00000492973 BCL7CQ8WUZ0 217 aaPredicted RBP8.42□□□□□ -1.06
TPR-208ENST00000492973 TMEM40Q8WWA1 233 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 ATG4CQ96DT6 458 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 MISP3Q96FF7 219 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 SPATA32Q96LK8 384 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 CCDC74BQ96LY2 380 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 GPR101Q96P66 508 aaPredicted RBP8.42□□□□□ -1.06
TPR-208ENST00000492973 SIL1Q9H173 461 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 TAOK3Q9H2K8 898 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 ANTXR1Q9H6X2 564 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 CNNM2Q9H8M5 875 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 ZNF277Q9NRM2 450 aaPredicted RBP8.42□□□□□ -1.06
TPR-208ENST00000492973 CNNM1Q9NRU3 951 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 NOP58Q9Y2X3 529 aaKnown RBP8.42□□□□□ -1.06
TPR-208ENST00000492973 SNX11Q9Y5W9 270 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 CAPN6Q9Y6Q1 641 aa8.42□□□□□ -1.06
TPR-208ENST00000492973 BRCA1P38398 1863 aaKnown RBP8.42□□□□□ -1.06
TPR-208ENST00000492973 XDHP47989 1333 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 IRS2Q9Y4H2 1338 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 RGS13O14921 159 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 TAF5LO75529 589 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 UFL1O94874 794 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 ERCC5P28715 1186 aaPredicted RBP8.41□□□□□ -1.06
TPR-208ENST00000492973 KIR3DL1P43629 444 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 LRRFIP1Q32MZ4 808 aaKnown RBP8.41□□□□□ -1.06
TPR-208ENST00000492973 STK11IPQ8N1F8 1099 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 MFSD4AQ8N468 514 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 KIF2CQ99661 725 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 ANKRD2Q9GZV1 360 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 TMX4Q9H1E5 349 aaPredicted RBP8.41□□□□□ -1.06
TPR-208ENST00000492973 CCSER2Q9H7U1 834 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
TPR-208ENST00000492973 DUOX1Q9NRD9 1551 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 MROH5Q6ZUA9 1318 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 IMPDH2P12268 514 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 KLRK1P26718 216 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 IL15P40933 162 aaPredicted RBP8.4□□□□□ -1.06
TPR-208ENST00000492973 SOX9P48436 509 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 CLCN7P51798 805 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 PRKCQQ04759 706 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 KIAA2012Q0VF49 1180 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 METTL24Q5JXM2 366 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 SMC5Q8IY18 1101 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 PHACTR4Q8IZ21 702 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 SUPT20HQ8NEM7 779 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 DCTPP1Q9H773 170 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 VAV3Q9UKW4 847 aa8.4□□□□□ -1.06
TPR-208ENST00000492973 ANGEL1Q9UNK9 670 aaKnown RBP8.4□□□□□ -1.06
TPR-208ENST00000492973 TAF1P21675 1872 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 ZNF804BA4D1E1 1349 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 PPIP5K2O43314 1243 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 SURF6O75683 361 aaKnown RBP8.39□□□□□ -1.07
TPR-208ENST00000492973 SASH1O94885 1247 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 UBOX5O94941 541 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 PDE8BO95263 885 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 NME1P15531 152 aaKnown RBP8.39□□□□□ -1.07
TPR-208ENST00000492973 RAG1P15918 1043 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 FGFR2P21802 821 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 IARSP41252 1262 aaKnown RBP8.39□□□□□ -1.07
TPR-208ENST00000492973 TNNI2P48788 182 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 TFCP2Q12800 502 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 G3BP1Q13283 466 aaKnown RBP eCLIP8.39□□□□□ -1.07
TPR-208ENST00000492973 UBE4AQ14139 1066 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 AOC3Q16853 763 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 XP32Q5T750 250 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 NLRC3Q7RTR2 1065 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 GCC1Q96CN9 775 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 HRASLS5Q96KN8 279 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 Q96M66 194 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 PAK6Q9NQU5 681 aaPredicted RBP8.39□□□□□ -1.07
TPR-208ENST00000492973 RNF181Q9P0P0 153 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 PPT2Q9UMR5 302 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 SLC5A6Q9Y289 635 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 EXOC6BQ9Y2D4 811 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 EFR3BQ9Y2G0 817 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 ST14Q9Y5Y6 855 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 COL4A5P29400 1685 aa8.39□□□□□ -1.07
TPR-208ENST00000492973 LRRC37AA6NMS7 1700 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 PITPNM2Q9BZ72 1349 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 TNFRSF10CO14798 259 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 HMMRO75330 724 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 CBX7O95931 251 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 GP2P55259 537 aaKnown RBP8.38□□□□□ -1.07
TPR-208ENST00000492973 BNIP3Q12983 259 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 C15orf52Q6ZUT6 534 aaKnown RBP8.38□□□□□ -1.07
TPR-208ENST00000492973 SPRED2Q7Z698 418 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 NBPF11Q86T75 865 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 RBBP8NLQ8NC74 664 aaPredicted RBP8.38□□□□□ -1.07
TPR-208ENST00000492973 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 VWCEQ96DN2 955 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms