RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 NFICP08651 508 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 MYBL2P10244 700 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 VCAM1P19320 739 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 GRIA2P42262 883 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 GPR85P60893 370 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 PIN1Q13526 163 aaPredicted RBP3.86□□□□□ -1.79
SNX13-209ENST00000492626 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.86□□□□□ -1.79
SNX13-209ENST00000492626 GPR161Q8N6U8 529 aaKnown RBP3.86□□□□□ -1.79
SNX13-209ENST00000492626 FBLIM1Q8WUP2 373 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 FAM122AQ96E09 287 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 RPS6KC1Q96S38 1066 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 MKS1Q9NXB0 559 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 TRHDEQ9UKU6 1024 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 SBF1O95248 1867 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 ECE1P42892 770 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 RAB27AP51159 221 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 KIZQ2M2Z5 673 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 FGD2Q7Z6J4 655 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 C2CD4AQ8NCU7 369 aaPredicted RBP3.86□□□□□ -1.79
SNX13-209ENST00000492626 THG1LQ9NWX6 298 aaKnown RBP3.86□□□□□ -1.79
SNX13-209ENST00000492626 LOC102724159A0A0B4J2E5 919 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 C9orf172C9J069 976 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 FKBP9O95302 570 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 WISP1O95388 367 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 CFBP00751 764 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 POU3F2P20265 443 aaPredicted RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 MLC1Q15049 377 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 PWP2Q15269 919 aaKnown RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 NFE2Q16621 373 aaPredicted RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 RNFT1Q5M7Z0 435 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 EEF1DP3Q658K8 133 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 FKBP9P1Q75LS8 142 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 CNTD1Q8N815 330 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 SPOCK3Q9BQ16 436 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 BTAF1O14981 1849 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 ADGRB1O14514 1584 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 H7C1D1 291 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 AKAP10O43572 662 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 SIGLEC6O43699 453 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 IFIT2P09913 472 aaKnown RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 PAMP19021 973 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 PCBP3P57721 371 aaKnown RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 ZRSR2Q15696 482 aaKnown RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 E4F1Q66K89 784 aaPredicted RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 AGGF1Q8N302 714 aaeCLIP3.85□□□□□ -1.79
SNX13-209ENST00000492626 IGSF22Q8N9C0 903 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 GSTCDQ8NEC7 633 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 DNAJB8Q8NHS0 232 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.85□□□□□ -1.79
SNX13-209ENST00000492626 ENOX1Q8TC92 643 aaKnown RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 TSR2Q969E8 191 aaKnown RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 FBXW5Q969U6 566 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 HOOK2Q96ED9 719 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 PCIF1Q9H4Z3 704 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 NUB1Q9Y5A7 615 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 C5P01031 1676 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 RASSF10A6NK89 507 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 H0Y8X5 98 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 M0R2C6 588 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 TERTO14746 1132 aaKnown RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 CELA2BP08218 269 aaPredicted RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 GTF2A2P52657 109 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 RHBDL3P58872 404 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 CYP27A1Q02318 531 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 CRY1Q16526 586 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 SYDE2Q5VT97 1194 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 STRA8Q7Z7C7 330 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 AHCYL2Q96HN2 611 aaKnown RBP3.85□□□□□ -1.79
SNX13-209ENST00000492626 ACSS3Q9H6R3 686 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 GPR27Q9NS67 375 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 KCNG1Q9UIX4 513 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 RPGRIP1LQ68CZ1 1315 aa3.85□□□□□ -1.79
SNX13-209ENST00000492626 ZNF646O15015 1829 aaPredicted RBP3.84□□□□□ -1.79
SNX13-209ENST00000492626 NPHP3-ACAD11A0A0J9YXS1 232 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 FBXO21O94952 628 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 MAP4P27816 1152 aaKnown RBP3.84□□□□□ -1.79
SNX13-209ENST00000492626 NTF4P34130 210 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 MAP2K2P36507 400 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 PREPP48147 710 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 TTLL7Q6ZT98 887 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 SMC5Q8IY18 1101 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 CHST14Q8NCH0 376 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 PIWIL2Q8TC59 973 aaKnown RBP3.84□□□□□ -1.79
SNX13-209ENST00000492626 IP6K2Q9UHH9 426 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 NOB1Q9ULX3 412 aaKnown RBP3.84□□□□□ -1.79
SNX13-209ENST00000492626 LUC7L2Q9Y383 392 aaKnown RBP3.84□□□□□ -1.79
SNX13-209ENST00000492626 PCDHA8Q9Y5H6 950 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.84□□□□□ -1.79
SNX13-209ENST00000492626 KRT37O76014 449 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 TIAF1O95411 115 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 TBC1D8O95759 1140 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 GSTM1P09488 218 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 VSIG8P0DPA2 414 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 ZSCAN20P17040 1043 aaPredicted RBP3.84□□□□□ -1.79
SNX13-209ENST00000492626 GRK2P25098 689 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 SESN3P58005 492 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 MTMR1Q13613 665 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 UVSSAQ2YD98 709 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 RRP12Q5JTH9 1297 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms