RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 IGKV6D-21A0A0A0MT36 114 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 H3BRB1 525 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 NOP56O00567 594 aaKnown RBP17.24■□□□□ 0.35
SS18L1-204ENST00000491916 SLC37A4O43826 429 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 TCF7P36402 384 aaPredicted RBP17.24■□□□□ 0.35
SS18L1-204ENST00000491916 ACTR2P61160 394 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 PTPN11Q06124 597 aaPredicted RBP17.24■□□□□ 0.35
SS18L1-204ENST00000491916 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 ETNPPLQ8TBG4 499 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 SLC5A5Q92911 643 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 C8orf76Q96K31 380 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 ZNF577Q9BSK1 485 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 TUT1Q9H6E5 874 aaKnown RBP17.24■□□□□ 0.35
SS18L1-204ENST00000491916 TMEM39AQ9NV64 488 aa17.24■□□□□ 0.35
SS18L1-204ENST00000491916 TRIOBPQ9H2D6 2365 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 CCDC194A0A1B0GVG4 234 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 ZNF200P98182 395 aaPredicted RBP17.23■□□□□ 0.35
SS18L1-204ENST00000491916 UTP14CQ5TAP6 766 aaKnown RBP17.23■□□□□ 0.35
SS18L1-204ENST00000491916 PPP4R3AQ6IN85 833 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 ABHD15Q6UXT9 468 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 NEK8Q86SG6 692 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 VWCEQ96DN2 955 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 SDF4Q9BRK5 362 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 KATNAL1Q9BW62 490 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 RNPEPQ9H4A4 650 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 PRDM5Q9NQX1 630 aaPredicted RBP17.23■□□□□ 0.35
SS18L1-204ENST00000491916 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
SS18L1-204ENST00000491916 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
SS18L1-204ENST00000491916 UMODL1Q5DID0 1318 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 KIF28PB7ZC32 967 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 PSMD10O75832 226 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 CYP2C9P11712 490 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 ADAM17P78536 824 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 MDM2Q00987 491 aaPredicted RBP17.22■□□□□ 0.35
SS18L1-204ENST00000491916 LETM2Q2VYF4 491 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 DHX38Q92620 1227 aaKnown RBP17.22■□□□□ 0.35
SS18L1-204ENST00000491916 BADQ92934 168 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 NOC4LQ9BVI4 516 aaKnown RBP17.22■□□□□ 0.35
SS18L1-204ENST00000491916 KCNMB3Q9NPA1 279 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 TBC1D22BQ9NU19 505 aa17.22■□□□□ 0.35
SS18L1-204ENST00000491916 EMSYQ7Z589 1322 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 WDR81Q562E7 1941 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 DDX39AO00148 427 aaKnown RBP17.21■□□□□ 0.35
SS18L1-204ENST00000491916 TIMP1P01033 207 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 GJB2P29033 226 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 BMP8BP34820 402 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 TRIM29Q14134 588 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 HAS1Q92839 578 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 WNT8BQ93098 351 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 SNX21Q969T3 373 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 RIT2Q99578 217 aa17.21■□□□□ 0.35
SS18L1-204ENST00000491916 FOXP1Q9H334 677 aaPredicted RBP17.21■□□□□ 0.35
SS18L1-204ENST00000491916 DDX25Q9UHL0 483 aaKnown RBP17.21■□□□□ 0.35
SS18L1-204ENST00000491916 SZT2Q5T011 3432 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 TLR3O15455 904 aaKnown RBP17.2■□□□□ 0.34
SS18L1-204ENST00000491916 SUPT20HL2P0C7V6 817 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 SMIM10L2AP0DMW4 78 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 SMIM10L2BP0DMW5 78 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 ATP4AP20648 1035 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 U2AF2P26368 475 aaKnown RBP eCLIP17.2■□□□□ 0.34
SS18L1-204ENST00000491916 CYP2C18P33260 490 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 EPHB4P54760 987 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 TRIM71Q2Q1W2 868 aaKnown RBP17.2■□□□□ 0.34
SS18L1-204ENST00000491916 FAM47CQ5HY64 1035 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 ZNF746Q6NUN9 644 aaPredicted RBP17.2■□□□□ 0.34
SS18L1-204ENST00000491916 CCDC60Q8IWA6 550 aaPredicted RBP17.2■□□□□ 0.34
SS18L1-204ENST00000491916 WNT8AQ9H1J5 351 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
SS18L1-204ENST00000491916 CCNT1O60563 726 aaKnown RBP17.19■□□□□ 0.34
SS18L1-204ENST00000491916 GCFC2P16383 781 aaKnown RBP17.19■□□□□ 0.34
SS18L1-204ENST00000491916 PTGISQ16647 500 aa17.19■□□□□ 0.34
SS18L1-204ENST00000491916 PLPPR4Q7Z2D5 763 aa17.19■□□□□ 0.34
SS18L1-204ENST00000491916 C7orf31Q8N865 590 aa17.19■□□□□ 0.34
SS18L1-204ENST00000491916 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
SS18L1-204ENST00000491916 UNC45AQ9H3U1 944 aa17.19■□□□□ 0.34
SS18L1-204ENST00000491916 SMARCAD1Q9H4L7 1026 aa17.19■□□□□ 0.34
SS18L1-204ENST00000491916 PRKAG2Q9UGJ0 569 aa17.19■□□□□ 0.34
SS18L1-204ENST00000491916 RAG1P15918 1043 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 MARK3P27448 753 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 KRT76Q01546 638 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 RBL2Q08999 1139 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 GPNMBQ14956 572 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 PLCB4Q15147 1175 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 MARCH8Q5T0T0 291 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 LRCH2Q5VUJ6 765 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 MFSD5Q6N075 450 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 TRAF7Q6Q0C0 670 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 C16orf59Q7L2K0 433 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 PPP1R12CQ9BZL4 782 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 HIPK3Q9H422 1215 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 SETD4Q9NVD3 440 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 ERAP1Q9NZ08 941 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 VAV3Q9UKW4 847 aa17.18■□□□□ 0.34
SS18L1-204ENST00000491916 MAFBQ9Y5Q3 323 aaPredicted RBP17.18■□□□□ 0.34
SS18L1-204ENST00000491916 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms