RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 DHX37Q8IY37 1157 aaKnown RBP10.63□□□□□ -0.71
BRCA1-219ENST00000491747 CRYGNQ8WXF5 182 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 VTI1AQ96AJ9 217 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 KCNJ14Q9UNX9 436 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 STK36Q9NRP7 1315 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 M0R2N6 131 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 FOSP01100 380 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-219ENST00000491747 TGFB3P10600 412 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 SREBF1P36956 1147 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 AP3B2Q13367 1082 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 KCNV1Q6PIU1 500 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-219ENST00000491747 FERMT3Q86UX7 667 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 SLC43A3Q8NBI5 491 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 CCDC12Q8WUD4 166 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-219ENST00000491747 EMID1Q96A84 441 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-219ENST00000491747 SPATA32Q96LK8 384 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 GLT8D2Q9H1C3 349 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 DACT1Q9NYF0 836 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 ARVCFO00192 962 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 CTIFO43310 598 aaKnown RBP10.62□□□□□ -0.71
BRCA1-219ENST00000491747 ZEB2O60315 1214 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 PQBP1O60828 265 aaKnown RBP10.62□□□□□ -0.71
BRCA1-219ENST00000491747 CDKL5O76039 1030 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 CAVIN2O95810 425 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 LIG1P18858 919 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 GNA11P29992 359 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 NLRP5P59047 1200 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 DMTNQ08495 405 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 ITGA7Q13683 1181 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 CAMK4Q16566 473 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 GNPTABQ3T906 1256 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 LUZP1Q86V48 1076 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 TEX2Q8IWB9 1127 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 REXO1Q8N1G1 1221 aaKnown RBP10.62□□□□□ -0.71
BRCA1-219ENST00000491747 CCDC148Q8NFR7 591 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 MXRA8Q9BRK3 442 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 JADE2Q9NQC1 790 aa10.62□□□□□ -0.71
BRCA1-219ENST00000491747 ORC3Q9UBD5 711 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-219ENST00000491747 A0A0U1RQG5 324 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-219ENST00000491747 TRIM43BA6NCK2 446 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 ARP10275 920 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 KCNA2P16389 499 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 ARHGAP4P98171 946 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 LAMC2Q13753 1193 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 ANO6Q4KMQ2 910 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 RBM43Q6ZSC3 357 aaKnown RBP10.61□□□□□ -0.71
BRCA1-219ENST00000491747 CYFIP1Q7L576 1253 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 ANKRD33Q7Z3H0 272 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 DRC7Q8IY82 874 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 KAT2BQ92831 832 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-219ENST00000491747 GPRASP2Q96D09 838 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 PHF20Q9BVI0 1012 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 PDLIM7Q9NR12 457 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 POLR3EQ9NVU0 708 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 PKD2L1Q9P0L9 805 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 PCDHA4Q9UN74 947 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 FAM86B1E9PN63 330 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 CABYRO75952 493 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 FAM86B2P0C5J1 330 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 ZSCAN20P17040 1043 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-219ENST00000491747 ITGB8P26012 769 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 NLRX1Q86UT6 975 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 PPTC7Q8NI37 304 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 ANKRD7Q92527 254 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 SPATA33Q96N06 139 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 MTG1Q9BT17 334 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-219ENST00000491747 GTPBP4Q9BZE4 634 aaKnown RBP10.61□□□□□ -0.71
BRCA1-219ENST00000491747 TRIM5Q9C035 493 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 EHMT1Q9H9B1 1298 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 MLXIPQ9HAP2 919 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 CBX8Q9HC52 389 aa10.61□□□□□ -0.71
BRCA1-219ENST00000491747 CEP290O15078 2479 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 CYP3A4P08684 503 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 HOXD8P13378 290 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-219ENST00000491747 CBX1P83916 185 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 MTMR1Q13613 665 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 NBPF20Q3BBV1 942 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 CCDC186Q7Z3E2 898 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 FAM126BQ8IXS8 530 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 CKAP2LQ8IYA6 745 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 BLIDQ8IZY5 108 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 DAGLBQ8NCG7 672 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 UIMC1Q96RL1 719 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 ALG1Q9BT22 464 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 CLSTN2Q9H4D0 955 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 KCNH7Q9NS40 1196 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 TRIP12Q14669 1992 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-219ENST00000491747 IGLV3-22A0A075B6J6 115 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 MEIS1O00470 390 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 CD4P01730 458 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 ZNF286BP0CG31 522 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 SYCP1Q15431 976 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 DGKDQ16760 1214 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 CEP55Q53EZ4 464 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 BRDTQ58F21 947 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms