RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 SETD4Q9NVD3 440 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 BARHL2Q9NY43 387 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 TELO2Q9Y4R8 837 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 EMSYQ7Z589 1322 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 CUL9Q8IWT3 2517 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 TANC1Q9C0D5 1861 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 CCDC196A0A1B0GTZ2 297 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 ABHD14A-ACY1A0A1B0GW23 586 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 SMCO2A6NFE2 343 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 MAFGO15525 162 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 TLL1O43897 1013 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 EFCAB14O75071 495 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 CAND2O75155 1236 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 LGR5O75473 907 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
LSM2-213ENST00000491421 RPS6KB1P23443 525 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 PSMA5P28066 241 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 ADD1P35611 737 aaKnown RBP9.45□□□□□ -0.9
LSM2-213ENST00000491421 ARHGAP4P98171 946 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 TCTN1Q2MV58 587 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 TMCO2Q7Z6W1 182 aaPredicted RBP9.45□□□□□ -0.9
LSM2-213ENST00000491421 LMBR1Q8WVP7 490 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 SEPT1Q8WYJ6 367 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 PGBD1Q96JS3 809 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 MXRA8Q9BRK3 442 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 ZBED2Q9BTP6 218 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 ANO3Q9BYT9 981 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 GLT8D2Q9H1C3 349 aa9.45□□□□□ -0.9
LSM2-213ENST00000491421 JPH1Q9HDC5 661 aaPredicted RBP9.45□□□□□ -0.9
LSM2-213ENST00000491421 FAM217BQ9NTX9 383 aaPredicted RBP9.45□□□□□ -0.9
LSM2-213ENST00000491421 RNF216Q9NWF9 866 aaPredicted RBP9.45□□□□□ -0.9
LSM2-213ENST00000491421 VCANP13611 3396 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 GSTTP1A0A1W2PQM5 241 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 CTSHP09668 335 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 SCG2P13521 617 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 MARK3P27448 753 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 DEFB103AP81534 67 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 TAP1Q03518 808 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 PPFIA1Q13136 1202 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 AP3B2Q13367 1082 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 CCDC85BQ15834 202 aaPredicted RBP9.44□□□□□ -0.9
LSM2-213ENST00000491421 PFKFB3Q16875 520 aaPredicted RBP9.44□□□□□ -0.9
LSM2-213ENST00000491421 GLG1Q92896 1179 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 COL25A1Q9BXS0 654 aaPredicted RBP9.44□□□□□ -0.9
LSM2-213ENST00000491421 CERS4Q9HA82 394 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 KCNH7Q9NS40 1196 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 TMEM260Q9NX78 707 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 ERAP1Q9NZ08 941 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 NRCAMQ92823 1304 aa9.44□□□□□ -0.9
LSM2-213ENST00000491421 NID2Q14112 1375 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 RBAK-RBAKDNI3L0D1 243 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 ARHGEF15O94989 841 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 GJB5O95377 273 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 AMHP03971 560 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 ZNF76P36508 570 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 SREBF1P36956 1147 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
LSM2-213ENST00000491421 ADAM17P78536 824 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 AKAP17AQ02040 695 aaKnown RBP9.43□□□□□ -0.9
LSM2-213ENST00000491421 CEP55Q53EZ4 464 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 MICALL1Q8N3F8 863 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 FBXL16Q8N461 479 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 DBF4BQ8NFT6 615 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 CYP2W1Q8TAV3 490 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 CCDC12Q8WUD4 166 aaPredicted RBP9.43□□□□□ -0.9
LSM2-213ENST00000491421 ARNTL2Q8WYA1 636 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 SEPT8Q92599 483 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 RAD9AQ99638 391 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 SMARCAD1Q9H4L7 1026 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 AZI2Q9H6S1 392 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 C6orf50Q9HD87 102 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 SLC9A2Q9UBY0 812 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
LSM2-213ENST00000491421 NFASCO94856 1347 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 ESYT2A0FGR8 921 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 LCHNA4D1U4 455 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 EPOPA6NHQ4 379 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 RFXAPO00287 272 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 MEIS1O00470 390 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 PRPF3O43395 683 aaKnown RBP9.42□□□□□ -0.9
LSM2-213ENST00000491421 EPB41L2O43491 1005 aaKnown RBP9.42□□□□□ -0.9
LSM2-213ENST00000491421 GTPBP6O43824 516 aaPredicted RBP9.42□□□□□ -0.9
LSM2-213ENST00000491421 ARP10275 920 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 ACTR2P61160 394 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
LSM2-213ENST00000491421 GRIK4Q16099 956 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 PLEKHG4Q58EX7 1191 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 JAKMIP3Q5VZ66 844 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 MCTP2Q6DN12 878 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 FAM117BQ6P1L5 589 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 TAF2Q6P1X5 1199 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.42□□□□□ -0.9
LSM2-213ENST00000491421 RUFY4Q6ZNE9 571 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 RSPH3Q86UC2 560 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 MYOCDQ8IZQ8 938 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 REXO1Q8N1G1 1221 aaKnown RBP9.42□□□□□ -0.9
LSM2-213ENST00000491421 PHKBQ93100 1093 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 AGXT2Q9BYV1 514 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 RNF39Q9H2S5 420 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms