RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-225ENST00000490851 PLA2G4BP0C869 781 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 ZNF18P17022 549 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 ITGB5P18084 799 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 PABPC4Q13310 644 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDAC9-225ENST00000490851 CTTNQ14247 550 aaKnown RBP11.23□□□□□ -0.61
HDAC9-225ENST00000490851 KCNB1Q14721 858 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 GPBP1Q86WP2 473 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 ADSSL1Q8N142 457 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 RMDN3Q96TC7 470 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 MED4Q9NPJ6 270 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 TBC1D7Q9P0N9 293 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 ZNF214Q9UL59 606 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-225ENST00000490851 PYCARDQ9ULZ3 195 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 RLFQ13129 1914 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 TRAF5O00463 557 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
HDAC9-225ENST00000490851 PMS1P54277 932 aaKnown RBP11.22□□□□□ -0.61
HDAC9-225ENST00000490851 STIM1Q13586 685 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 ARHGEF16Q5VV41 709 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
HDAC9-225ENST00000490851 GIMAP8Q8ND71 665 aaPredicted RBP11.22□□□□□ -0.61
HDAC9-225ENST00000490851 REPS2Q8NFH8 660 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
HDAC9-225ENST00000490851 ZBTB9Q96C00 473 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 CCDC97Q96F63 343 aaPredicted RBP11.22□□□□□ -0.61
HDAC9-225ENST00000490851 EIF2AK1Q9BQI3 630 aaKnown RBP11.22□□□□□ -0.61
HDAC9-225ENST00000490851 MXRA8Q9BRK3 442 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 POLD4Q9HCU8 107 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 RWDD2AQ9UIY3 292 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 WDR90Q96KV7 1748 aa11.22□□□□□ -0.61
HDAC9-225ENST00000490851 IPO5O00410 1097 aaKnown RBP11.21□□□□□ -0.61
HDAC9-225ENST00000490851 PSMA7O14818 248 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 TPD52L2O43399 206 aaKnown RBP11.21□□□□□ -0.61
HDAC9-225ENST00000490851 CBFA2T2O43439 604 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 SPATA31C1P0DKV0 1188 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 LRRC41Q15345 812 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 TPH2Q8IWU9 490 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 GLIS3Q8NEA6 775 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 CACTINQ8WUQ7 758 aaKnown RBP11.21□□□□□ -0.61
HDAC9-225ENST00000490851 SLC5A5Q92911 643 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 TRIM47Q96LD4 638 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 PAGR1Q9BTK6 254 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 UNC45AQ9H3U1 944 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 INTS13Q9NVM9 706 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 PSMD10O75832 226 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 MRPS9P82933 396 aaKnown RBP11.21□□□□□ -0.61
HDAC9-225ENST00000490851 GOLGA8FQ08AF8 430 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 GOLGA8DPQ0D2H9 430 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 HYIQ5T013 277 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 ZNF280DQ6N043 979 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 CNNM4Q6P4Q7 775 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 ANKRD13AQ8IZ07 590 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 KIAA0895Q8NCT3 520 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 DYDC2Q96IM9 177 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 TEX13BQ9BXU2 312 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 KCNH7Q9NS40 1196 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 HOXC10Q9NYD6 342 aa11.21□□□□□ -0.61
HDAC9-225ENST00000490851 RPTORQ8N122 1335 aa11.21□□□□□ -0.62
HDAC9-225ENST00000490851 IQCA1LA6NCM1 817 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 FDX1P10109 184 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 RPA1P27694 616 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 PGM5Q15124 567 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 TKFCQ3LXA3 575 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 TMCO4Q5TGY1 634 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 UNC13DQ70J99 1090 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 TRMT1LQ7Z2T5 733 aaKnown RBP11.2□□□□□ -0.62
HDAC9-225ENST00000490851 ZC3H15Q8WU90 426 aaKnown RBP11.2□□□□□ -0.62
HDAC9-225ENST00000490851 PXMP2Q9NR77 195 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-225ENST00000490851 DNM3Q9UQ16 869 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 PTPRFP10586 1907 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 PPP1R12AO14974 1030 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-225ENST00000490851 ZBTB39O15060 712 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 SORBS3O60504 671 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 TPM3P06753 285 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 FOXD4Q12950 439 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-225ENST00000490851 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
HDAC9-225ENST00000490851 MTMR1Q13613 665 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 SH3D19Q5HYK7 790 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 CDKAL1Q5VV42 579 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 PCNX4Q63HM2 1172 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 ERO1BQ86YB8 467 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 PDCD2LQ9BRP1 358 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 TEKT3Q9BXF9 490 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 PANK4Q9NVE7 773 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 SAMM50Q9Y512 469 aa11.2□□□□□ -0.62
HDAC9-225ENST00000490851 RBBP6Q7Z6E9 1792 aaKnown RBP11.2□□□□□ -0.62
HDAC9-225ENST00000490851 PES1O00541 588 aaKnown RBP11.19□□□□□ -0.62
HDAC9-225ENST00000490851 NEFHP12036 1026 aa11.19□□□□□ -0.62
HDAC9-225ENST00000490851 GTF2A1P52655 376 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-225ENST00000490851 COASYQ13057 564 aa11.19□□□□□ -0.62
HDAC9-225ENST00000490851 SWT1Q5T5J6 900 aaKnown RBP11.19□□□□□ -0.62
HDAC9-225ENST00000490851 CXorf38Q8TB03 319 aa11.19□□□□□ -0.62
HDAC9-225ENST00000490851 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms