RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 LRRN4CLQ8ND94 238 aa9.78□□□□□ -0.84
CSMD2-209ENST00000489419 GOLGA1Q92805 767 aa9.78□□□□□ -0.84
CSMD2-209ENST00000489419 PCMTD1Q96MG8 357 aaPredicted RBP9.78□□□□□ -0.84
CSMD2-209ENST00000489419 P2RX7Q99572 595 aaKnown RBP9.78□□□□□ -0.84
CSMD2-209ENST00000489419 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
CSMD2-209ENST00000489419 NUCKS1Q9H1E3 243 aaKnown RBP9.78□□□□□ -0.84
CSMD2-209ENST00000489419 DEFB129Q9H1M3 183 aa9.78□□□□□ -0.84
CSMD2-209ENST00000489419 AGPAT5Q9NUQ2 364 aa9.78□□□□□ -0.84
CSMD2-209ENST00000489419 REXO2Q9Y3B8 237 aaKnown RBP9.78□□□□□ -0.84
CSMD2-209ENST00000489419 COL4A3BPQ9Y5P4 624 aa9.78□□□□□ -0.84
CSMD2-209ENST00000489419 POTEB3A0JP26 581 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 POTECB2RU33 542 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 TCP10L2B9ZVM9 353 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 POTEB2H3BUK9 544 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 KRT86O43790 486 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 MED24O75448 989 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 TUBBP07437 444 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 EN1Q05925 392 aaPredicted RBP9.77□□□□□ -0.84
CSMD2-209ENST00000489419 HERC4Q5GLZ8 1057 aaPredicted RBP9.77□□□□□ -0.84
CSMD2-209ENST00000489419 POTEBQ6S5H4 581 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 CATSPER3Q86XQ3 398 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 SLC35F6Q8N357 371 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 RANBP17Q9H2T7 1088 aaKnown RBP9.77□□□□□ -0.84
CSMD2-209ENST00000489419 VCPKMTQ9H867 229 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 NHEJ1Q9H9Q4 299 aaPredicted RBP9.77□□□□□ -0.84
CSMD2-209ENST00000489419 EMILIN3Q9NT22 766 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 FAM184BQ9ULE4 1060 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 ZBTB21Q9ULJ3 1066 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 ZNRF3Q9ULT6 936 aa9.77□□□□□ -0.84
CSMD2-209ENST00000489419 MRPL11Q9Y3B7 192 aaKnown RBP9.77□□□□□ -0.84
CSMD2-209ENST00000489419 CNTNAP1P78357 1384 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 KLHL33A6NCF5 533 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 FAM86B1E9PN63 330 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 MSH4O15457 936 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 FAM86B2P0C5J1 330 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 SPATA31C1P0DKV0 1188 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 USH1GQ495M9 461 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 ARSHQ5FYA8 562 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 SYN2Q92777 582 aaPredicted RBP9.77□□□□□ -0.85
CSMD2-209ENST00000489419 ZBED3Q96IU2 234 aaPredicted RBP9.77□□□□□ -0.85
CSMD2-209ENST00000489419 TSGA10Q9BZW7 698 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 GINM1Q9NU53 330 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 FEM1BQ9UK73 627 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 RABGAP1Q9Y3P9 1069 aa9.77□□□□□ -0.85
CSMD2-209ENST00000489419 GCOM1H8Y6P7 765 aaPredicted RBP9.76□□□□□ -0.85
CSMD2-209ENST00000489419 TRAF5O00463 557 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 LCA5LO95447 670 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 SSBP05455 408 aaKnown RBP eCLIP9.76□□□□□ -0.85
CSMD2-209ENST00000489419 KRT18P05783 430 aaKnown RBP9.76□□□□□ -0.85
CSMD2-209ENST00000489419 POLR2MP0CAP2 368 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 KCNA3P22001 575 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 ZNF76P36508 570 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 TXLNBQ8N3L3 684 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 GJA10Q969M2 543 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 KCTD10Q9H3F6 313 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 TUFT1Q9NNX1 390 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 VAV3Q9UKW4 847 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 IGLV3-22A0A075B6J6 115 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 A0A0U1RQJ8 604 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 RAD17O75943 681 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 EYA4O95677 639 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 CAP2P40123 477 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 CLCN6P51797 869 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 CHMP4BP1P59074 171 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 HERVK_113P62684 666 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 GIT2Q14161 759 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 LRRC41Q15345 812 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 SPA17Q15506 151 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 NCAPH2Q6IBW4 605 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 TMCO3Q6UWJ1 677 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 KIAA1328Q86T90 577 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 ACER1Q8TDN7 264 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 SCFD1Q8WVM8 642 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 ATRIPQ8WXE1 791 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 CCDC42Q96M95 316 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 SUFUQ9UMX1 484 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 TRAF3IP3Q9Y228 551 aa9.76□□□□□ -0.85
CSMD2-209ENST00000489419 CLRN2A0PK11 232 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 PPP1R12AO14974 1030 aaPredicted RBP9.75□□□□□ -0.85
CSMD2-209ENST00000489419 ASNSP08243 561 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 GAP43P17677 238 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 STAT3P40763 770 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 ECE1P42892 770 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 SNAP25P60880 206 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 AMPD2Q01433 879 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 BMT2Q1RMZ1 405 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 CCDC40Q4G0X9 1142 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 CCDC122Q5T0U0 273 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 EPM2AIP1Q7L775 607 aaPredicted RBP9.75□□□□□ -0.85
CSMD2-209ENST00000489419 TRIM59Q8IWR1 403 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 NIM1KQ8IY84 436 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 KRT222Q8N1A0 295 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 NEK11Q8NG66 645 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 EEF2KMTQ96G04 330 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 FAM210AQ96ND0 272 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 PURBQ96QR8 312 aaKnown RBP9.75□□□□□ -0.85
CSMD2-209ENST00000489419 PGAP2Q9UHJ9 254 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 SSU72P8A0A1W2PR75 194 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 ANO9A1A5B4 782 aa9.75□□□□□ -0.85
CSMD2-209ENST00000489419 POTEFA5A3E0 1075 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms