RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ATP5JP18859 108 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 SHMT1P34896 483 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 ADD2P35612 726 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 FCGRTP55899 365 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 PCDH1Q08174 1060 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 FAAP100Q0VG06 881 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 IKBKEQ14164 716 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 MBTPS1Q14703 1052 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 RAB3GAP1Q15042 981 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 TTF1Q15361 905 aaPredicted RBP7.12□□□□□ -1.27
CDHR3-213ENST00000488386 C3orf58Q8NDZ4 430 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 ACER1Q8TDN7 264 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 UBASH3BQ8TF42 649 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDHR3-213ENST00000488386 ARMC5Q96C12 935 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 ZNF333Q96JL9 665 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 HAUS7Q99871 368 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 DUSP9Q99956 384 aaKnown RBP7.12□□□□□ -1.27
CDHR3-213ENST00000488386 CLEC4MQ9H2X3 399 aaPredicted RBP7.12□□□□□ -1.27
CDHR3-213ENST00000488386 SRA1Q9HD15 236 aaKnown RBP7.12□□□□□ -1.27
CDHR3-213ENST00000488386 MCM9Q9NXL9 1143 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 SRRDQ9UH36 339 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 RBBP6Q7Z6E9 1792 aaKnown RBP7.12□□□□□ -1.27
CDHR3-213ENST00000488386 MKI67P46013 3256 aaKnown RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 MPHOSPH10O00566 681 aaKnown RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 TNPO2O14787 897 aaKnown RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 PROCP04070 461 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 GUCY1A2P33402 732 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 BACE1P56817 501 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 NLRP12P59046 1061 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 ADGRE1Q14246 886 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 METTL16Q86W50 562 aaKnown RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 FOXP4Q8IVH2 680 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 MAP4K3Q8IVH8 894 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 RAET1EQ8TD07 263 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 LENG1Q96BZ8 264 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 P2RX7Q99572 595 aaKnown RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 PUS7LQ9H0K6 701 aaKnown RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 ASCC2Q9H1I8 757 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 DCTPP1Q9H773 170 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 AS3MTQ9HBK9 375 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 TXNRD2Q9NNW7 524 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 DCP1AQ9NPI6 582 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-213ENST00000488386 SERPINB13Q9UIV8 391 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 PLXNB2O15031 1838 aa7.11□□□□□ -1.27
CDHR3-213ENST00000488386 M0R2C6 588 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 ASNSP08243 561 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 CD68P34810 354 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-213ENST00000488386 FLT3LGP49771 235 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 IRX3P78415 501 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-213ENST00000488386 SEPT2Q15019 361 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 ABCB5Q2M3G0 1257 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 CERKLQ49MI3 558 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-213ENST00000488386 KIAA1755Q5JYT7 1200 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 FAM117BQ6P1L5 589 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 TATDN1Q6P1N9 297 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 TTC6Q86TZ1 520 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 KLHL23Q8NBE8 558 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 FAM161BQ96MY7 647 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 SEC62Q99442 399 aaKnown RBP7.1□□□□□ -1.27
CDHR3-213ENST00000488386 FEZ1Q99689 392 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 PAGR1Q9BTK6 254 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 WDR18Q9BV38 432 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 CRNKL1Q9BZJ0 848 aaKnown RBP7.1□□□□□ -1.27
CDHR3-213ENST00000488386 NRSN2Q9GZP1 204 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 CHMP4BQ9H444 224 aaKnown RBP7.1□□□□□ -1.27
CDHR3-213ENST00000488386 ECHDC1Q9NTX5 307 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 TMOD4Q9NZQ9 345 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 SLC4A4Q9Y6R1 1079 aa7.1□□□□□ -1.27
CDHR3-213ENST00000488386 KIAA0100Q14667 2235 aaKnown RBP7.09□□□□□ -1.27
CDHR3-213ENST00000488386 A0A1W2PRG0 241 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 ALX3O95076 343 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 B3GALT4O96024 378 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 AKR1B1P15121 316 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 CYP2B6P20813 491 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 GNA15P30679 374 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 GRK4P32298 578 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 GABPAQ06546 454 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 C19orf57Q0VDD7 668 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 ARHGEF6Q15052 776 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 IGF2-ASQ6U949 168 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 NBPF11Q86T75 865 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 AGGF1Q8N302 714 aaeCLIP7.09□□□□□ -1.27
CDHR3-213ENST00000488386 WNT8BQ93098 351 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 SHISA4Q96DD7 197 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 NACC1Q96RE7 527 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 SPOCK3Q9BQ16 436 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 C12orf49Q9H741 205 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 OSGEPQ9NPF4 335 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 PARP2Q9UGN5 583 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 SLC45A1Q9Y2W3 748 aa7.09□□□□□ -1.27
CDHR3-213ENST00000488386 C9orf172C9J069 976 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 ADCY3O60266 1144 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 CNMDO75829 334 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 CTSBP07858 339 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 USP17L7P0C7H9 530 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 CCL5P13501 91 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 HOXD10P28358 340 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 NOS3P29474 1203 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms