RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 CCDC39Q9UFE4 941 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 GPR160Q9UJ42 338 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 ZNF180Q9UJW8 692 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 K7ESF4 209 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 CLASP2O75122 1294 aaKnown RBP6.25□□□□□ -1.41
SRRM1-215ENST00000488317 SNUPNO95149 360 aaKnown RBP6.25□□□□□ -1.41
SRRM1-215ENST00000488317 ARL4AP40617 200 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 ERVK-21P61565 698 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 BTBD8Q5XKL5 378 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 FSTL4Q6MZW2 842 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 SLC23A3Q6PIS1 610 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 KCTD1Q719H9 257 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 RASSF3Q86WH2 238 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 DCP2Q8IU60 420 aaKnown RBP6.25□□□□□ -1.41
SRRM1-215ENST00000488317 NOSTRINQ8IVI9 506 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 SIRT2Q8IXJ6 389 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 MYO1HQ8N1T3 1032 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 SMOC1Q9H4F8 434 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 C19orf44Q9H6X5 657 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 LUC7LQ9NQ29 371 aaKnown RBP6.25□□□□□ -1.41
SRRM1-215ENST00000488317 MKS1Q9NXB0 559 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 MYOTQ9UBF9 498 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 GABBR1Q9UBS5 961 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 IP6K2Q9UHH9 426 aa6.25□□□□□ -1.41
SRRM1-215ENST00000488317 NOB1Q9ULX3 412 aaKnown RBP6.25□□□□□ -1.41
SRRM1-215ENST00000488317 LUC7L2Q9Y383 392 aaKnown RBP6.25□□□□□ -1.41
SRRM1-215ENST00000488317 PRC1O43663 620 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 PSPNO60542 156 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 CFBP00751 764 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 LTFP02788 710 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 PRNPP04156 253 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 CYP17A1P05093 508 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 RAC2P15153 192 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 ZSCAN20P17040 1043 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 ATF3P18847 181 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 FUT4P22083 530 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 PTX3P26022 381 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 TRHRP34981 398 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 ERVFC1P60507 584 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 SMAD3P84022 425 aaKnown RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 TUSC3Q13454 348 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 PLCL1Q15111 1095 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 SMAD2Q15796 467 aaKnown RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 CLUL1Q15846 466 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 CYP4F22Q6NT55 531 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 CC2D1AQ6P1N0 951 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 ZZZ3Q8IYH5 903 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 CBARPQ8N350 705 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 ZNF610Q8N9Z0 462 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 SEC14L1Q92503 715 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 CDH19Q9H159 772 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 MS4A5Q9H3V2 200 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 RXFP1Q9HBX9 757 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 KCNH7Q9NS40 1196 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 TOPORSQ9NS56 1045 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 DBR1Q9UK59 544 aaKnown RBP6.24□□□□□ -1.41
SRRM1-215ENST00000488317 SIT1Q9Y3P8 196 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 PCDHB4Q9Y5E5 795 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 B3GALT1Q9Y5Z6 326 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 MRFAP1Q9Y605 127 aa6.24□□□□□ -1.41
SRRM1-215ENST00000488317 PRAMEF25A6NGN4 478 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 NOTOA8MTQ0 251 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 TADA3O75528 432 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 MED26O95402 600 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 IGHA1P01876 353 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 GLI4P10075 376 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 PTPN1P18031 435 aaKnown RBP6.23□□□□□ -1.41
SRRM1-215ENST00000488317 CD40P25942 277 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 SLC6A11P48066 632 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 PHC1P78364 1004 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 GRIN1Q05586 938 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 PCBP2Q15366 365 aaKnown RBP eCLIP6.23□□□□□ -1.41
SRRM1-215ENST00000488317 NR0B2Q15466 257 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 EMC4Q5J8M3 183 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 FRMD7Q6ZUT3 714 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 MILR1Q7Z6M3 343 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 TRIM48Q8IWZ4 208 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 TP53INP2Q8IXH6 220 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 AMOTL1Q8IY63 956 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 PHOSPHO1Q8TCT1 267 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 JPH3Q8WXH2 748 aaPredicted RBP6.23□□□□□ -1.41
SRRM1-215ENST00000488317 DLG3Q92796 817 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 FAXDC2Q96IV6 333 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 RTFDC1Q9BY42 306 aaPredicted RBP6.23□□□□□ -1.41
SRRM1-215ENST00000488317 NUDT5Q9UKK9 219 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 PALD1Q9ULE6 856 aa6.23□□□□□ -1.41
SRRM1-215ENST00000488317 FAM90A27PA6NNH2 459 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 KIF3BO15066 747 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 XPOTO43592 962 aaKnown RBP6.22□□□□□ -1.41
SRRM1-215ENST00000488317 KDM1AO60341 852 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 BUB1BO60566 1050 aaPredicted RBP6.22□□□□□ -1.41
SRRM1-215ENST00000488317 HPXP02790 462 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 PNLIPP16233 465 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 GJA4P35212 333 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 GDNFP39905 211 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 GALK1P51570 392 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 SEC23AQ15436 765 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 INAVAQ3KP66 663 aa6.22□□□□□ -1.41
SRRM1-215ENST00000488317 GPR158Q5T848 1215 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms