RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 H0YHG0 523 aa17.97■□□□□ 0.47
GCOM1-210ENST00000488175 CEP104O60308 925 aa17.97■□□□□ 0.47
GCOM1-210ENST00000488175 SLC9A1P19634 815 aa17.97■□□□□ 0.47
GCOM1-210ENST00000488175 MDH1P40925 334 aaKnown RBP17.97■□□□□ 0.47
GCOM1-210ENST00000488175 MNAT1P51948 309 aa17.97■□□□□ 0.47
GCOM1-210ENST00000488175 TNNC1P63316 161 aa17.97■□□□□ 0.47
GCOM1-210ENST00000488175 HDLBPQ00341 1268 aaKnown RBP17.97■□□□□ 0.47
GCOM1-210ENST00000488175 KCNH2Q12809 1159 aa17.97■□□□□ 0.47
GCOM1-210ENST00000488175 CCT8L2Q96SF2 557 aa17.97■□□□□ 0.47
GCOM1-210ENST00000488175 PPANQ9NQ55 473 aaKnown RBP17.97■□□□□ 0.47
GCOM1-210ENST00000488175 SMARCA1P28370 1054 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 ITGB3BPQ13352 177 aaPredicted RBP17.96■□□□□ 0.47
GCOM1-210ENST00000488175 RNF187Q5TA31 235 aaPredicted RBP17.96■□□□□ 0.47
GCOM1-210ENST00000488175 ZNF571Q7Z3V5 609 aaPredicted RBP17.96■□□□□ 0.47
GCOM1-210ENST00000488175 CD302Q8IX05 232 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 GANQ9H2C0 597 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 TAF1DQ9H5J8 278 aaPredicted RBP17.96■□□□□ 0.47
GCOM1-210ENST00000488175 AIPL1Q9NZN9 384 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 PCDHA2Q9Y5H9 948 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 POTEB3A0JP26 581 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 POTECB2RU33 542 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 E7EVH7 732 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 PPP1R11O60927 126 aaPredicted RBP17.96■□□□□ 0.47
GCOM1-210ENST00000488175 SLC16A2P36021 539 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 HSD17B3P37058 310 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 MCTP2Q6DN12 878 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 TTBK2Q6IQ55 1244 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 POTEBQ6S5H4 581 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 NLRP14Q86W24 1093 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 GPBP1Q86WP2 473 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 CEP63Q96MT8 703 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 EMILIN3Q9NT22 766 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 NARFQ9UHQ1 456 aa17.96■□□□□ 0.47
GCOM1-210ENST00000488175 FAM170AA1A519 330 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 PLA2G4BP0C869 781 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 ECHS1P30084 290 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 ARHGAP27Q6ZUM4 889 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 MYCBPAPQ8TBZ2 947 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 NEUROG2Q9H2A3 272 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 KCTD10Q9H3F6 313 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 TMEM59LQ9UK28 342 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 KIF4AO95239 1232 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 HSPA9P38646 679 aaKnown RBP17.95■□□□□ 0.46
GCOM1-210ENST00000488175 ZNF804AQ7Z570 1209 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 CCDC65Q8IXS2 484 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 JMJD4Q9H9V9 463 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
GCOM1-210ENST00000488175 BCCIPQ9P287 314 aaKnown RBP eCLIP17.95■□□□□ 0.46
GCOM1-210ENST00000488175 GPR75-ASB3A0A0A6YYF3 556 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 STAT3P40763 770 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 FNTAP49354 379 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 IFT88Q13099 833 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 SF3B2Q13435 895 aaKnown RBP17.94■□□□□ 0.46
GCOM1-210ENST00000488175 PICALMQ13492 652 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 PPP4R3AQ6IN85 833 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 IRF2BP2Q7Z5L9 587 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 ADGRF4Q8IZF3 695 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 SPAG5Q96R06 1193 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 DDX47Q9H0S4 455 aaKnown RBP17.94■□□□□ 0.46
GCOM1-210ENST00000488175 ISCUQ9H1K1 167 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 TMBIM4Q9HC24 238 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 TMCO5BA8MYB1 307 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 HMGB1P1B2RPK0 211 aaPredicted RBP17.94■□□□□ 0.46
GCOM1-210ENST00000488175 GNPATO15228 680 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 GNA14O95837 355 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 KRT18P05783 430 aaKnown RBP17.94■□□□□ 0.46
GCOM1-210ENST00000488175 MYBP10242 640 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 NR2F2P24468 414 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 FLT3P36888 993 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 CASP5P51878 434 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 RHBDL3P58872 404 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 PDE4CQ08493 712 aa17.94■□□□□ 0.46
GCOM1-210ENST00000488175 UAP1Q16222 522 aaPredicted RBP17.94■□□□□ 0.46
GCOM1-210ENST00000488175 GOLGA6L10A6NI86 522 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 SART1O43290 800 aaKnown RBP17.93■□□□□ 0.46
GCOM1-210ENST00000488175 AKR1B1P15121 316 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 EMC10Q5UCC4 262 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 PRPF38AQ8NAV1 312 aaKnown RBP17.93■□□□□ 0.46
GCOM1-210ENST00000488175 LEMD3Q9Y2U8 911 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 COL14A1Q05707 1796 aaKnown RBP17.93■□□□□ 0.46
GCOM1-210ENST00000488175 BACH1O14867 736 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 ITGA4P13612 1032 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 CYP11B2P19099 503 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 CTNNA1P35221 906 aaKnown RBP17.93■□□□□ 0.46
GCOM1-210ENST00000488175 IRX3P78415 501 aaPredicted RBP17.93■□□□□ 0.46
GCOM1-210ENST00000488175 FOXR2Q6PJQ5 311 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 CNPY4Q8N129 248 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 HDAC9Q9UKV0 1011 aa17.93■□□□□ 0.46
GCOM1-210ENST00000488175 GCOM1H8Y6P7 765 aaPredicted RBP17.92■□□□□ 0.46
GCOM1-210ENST00000488175 CETN3O15182 167 aa17.92■□□□□ 0.46
GCOM1-210ENST00000488175 MYZAPP0CAP1 466 aa17.92■□□□□ 0.46
GCOM1-210ENST00000488175 UCHL3P15374 230 aa17.92■□□□□ 0.46
GCOM1-210ENST00000488175 TMOD1P28289 359 aa17.92■□□□□ 0.46
GCOM1-210ENST00000488175 USP11P51784 963 aa17.92■□□□□ 0.46
GCOM1-210ENST00000488175 MARSP56192 900 aaKnown RBP17.92■□□□□ 0.46
GCOM1-210ENST00000488175 SEPT2Q15019 361 aa17.92■□□□□ 0.46
GCOM1-210ENST00000488175 DPP8Q6V1X1 898 aaPredicted RBP17.92■□□□□ 0.46
GCOM1-210ENST00000488175 METTL13Q8N6R0 699 aa17.92■□□□□ 0.46
GCOM1-210ENST00000488175 SCFD2Q8WU76 684 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms