RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 PCDHGB7Q9Y5F8 929 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 C3P01024 1663 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 MROH7-TTC4A0A0A0MT08 1334 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 ITIH6Q6UXX5 1313 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 TSPOAP1O95153 1857 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 CARMIL3Q8ND23 1372 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 AKR1B15C9JRZ8 316 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PDLIM1O00151 329 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PPFIA2O75334 1257 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 FAM107AO95990 144 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PDHBP11177 359 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PFKFB1P16118 471 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TNFRSF8P28908 595 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 GBP2P32456 591 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 GRIA4P48058 902 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TNNI2P48788 182 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 FCGRTP55899 365 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZC3H6P61129 1189 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PLAURQ03405 335 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 HYAL2Q12891 473 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 FZD5Q13467 585 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 MTF1Q14872 753 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PTGISQ16647 500 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 NAALADL2Q58DX5 795 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TTMPQ5BVD1 217 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF468Q5VIY5 522 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 EFCAB2Q5VUJ9 269 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PAPD7Q5XG87 772 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 SLC4A10Q6U841 1118 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF662Q6ZS27 426 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 BZW1Q7L1Q6 419 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF572Q7Z3I7 529 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 SYT9Q86SS6 491 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 NCAPG2Q86XI2 1143 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 CEP57Q86XR8 500 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 CCNJLQ8IV13 435 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 APLFQ8IW19 511 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 MYCBPAPQ8TBZ2 947 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 CCHCR1Q8TD31 782 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TRPM4Q8TD43 1214 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZFAND2BQ8WV99 257 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 FMNL2Q96PY5 1086 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 MMTAG2Q9BU76 263 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 STK31Q9BXU1 1019 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 AGXT2Q9BYV1 514 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 USP44Q9H0E7 712 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 LIN7BQ9HAP6 207 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 LZTFL1Q9NQ48 299 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 COPRSQ9NQ92 184 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ECHDC1Q9NTX5 307 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 NPATQ14207 1427 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 UBN2Q6ZU65 1347 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 SH3TC1Q8TE82 1336 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 BCL9LQ86UU0 1499 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 MLH3Q9UHC1 1453 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 NALCNQ8IZF0 1738 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ELOA3CA0A087WX78 387 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 LOC102724428A0A0B4J2F2 783 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TMEM238LA0A1B0GVL6 79 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PTPDC1A2A3K4 754 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 C5orf60A6NFR6 353 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ELOA3DA6NLF2 546 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 MFAP3LO75121 409 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 CTDNEP1O95476 244 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TFRCP02786 760 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 UBTFL1P0CB47 393 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 GHRP10912 638 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 IMPDH2P12268 514 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 GCLCP48506 637 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 RBM5P52756 815 aaKnown RBP eCLIP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 NRLP54845 237 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ADKP55263 362 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 SIK1P57059 783 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PCBP4P57723 403 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ATP11AP98196 1134 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ROR2Q01974 943 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 CEBPZQ03701 1054 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 PDCLQ13371 301 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 KCNB1Q14721 858 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 NR1I3Q14994 352 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 SPRED3Q2MJR0 410 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ELOA3BQ3SY89 546 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ANKRD20A8PQ5CZ79 823 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 C1QTNF12Q5T7M4 302 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 CWF19L1Q69YN2 538 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 NCAPH2Q6IBW4 605 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TMEM132EQ6IEE7 984 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 CAPRIN2Q6IMN6 1127 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 EMBQ6PCB8 327 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 OLFM4Q6UX06 510 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 RBM12BQ8IXT5 1001 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ELOA3Q8NG57 546 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ENOX1Q8TC92 643 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 CAVIN3Q969G5 261 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 MKL1Q969V6 931 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZBTB10Q96DT7 871 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 GPATCH3Q96I76 525 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TRIM56Q9BRZ2 755 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 C15orf41Q9Y2V0 281 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms