RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 GFRA1P56159 465 aa5.84□□□□□ -1.47
SMC4-220ENST00000488017 USP10Q14694 798 aaKnown RBP5.84□□□□□ -1.47
SMC4-220ENST00000488017 PRSS53Q2L4Q9 553 aa5.84□□□□□ -1.47
SMC4-220ENST00000488017 ZNF568Q3ZCX4 644 aa5.84□□□□□ -1.47
SMC4-220ENST00000488017 FUKQ8N0W3 1084 aa5.84□□□□□ -1.47
SMC4-220ENST00000488017 EXTL1Q92935 676 aa5.84□□□□□ -1.47
SMC4-220ENST00000488017 CDIP1Q9H305 208 aa5.84□□□□□ -1.47
SMC4-220ENST00000488017 ZFP69BQ9UJL9 534 aa5.84□□□□□ -1.47
SMC4-220ENST00000488017 CKMP06732 381 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 INHBCP55103 352 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 RAC3P60763 192 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 LRCH2Q5VUJ6 765 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 GPR155Q7Z3F1 870 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 POLNQ7Z5Q5 900 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 CLEC4DQ8WXI8 215 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 ARHGAP20Q9P2F6 1191 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 LRP2BPQ9P2M1 347 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 SLC30A1Q9Y6M5 507 aa5.83□□□□□ -1.48
SMC4-220ENST00000488017 H0Y858 1186 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 PLSCR1O15162 318 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 ENO2P09104 434 aaPredicted RBP5.82□□□□□ -1.48
SMC4-220ENST00000488017 FAHP16930 419 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 SF1Q15637 639 aaKnown RBP5.82□□□□□ -1.48
SMC4-220ENST00000488017 SKIDA1Q1XH10 827 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 SV2CQ496J9 727 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 PHF19Q5T6S3 580 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 DENND5AQ6IQ26 1287 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 Q6ZSN1 163 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 METTL16Q86W50 562 aaKnown RBP5.82□□□□□ -1.48
SMC4-220ENST00000488017 DNAJC10Q8IXB1 793 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 TMEM145Q8NBT3 493 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 PIP4K2CQ8TBX8 421 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 FAM89AQ96GI7 184 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 C1orf159Q96HA4 380 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 CARD11Q9BXL7 1154 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 NUB1Q9Y5A7 615 aa5.82□□□□□ -1.48
SMC4-220ENST00000488017 SLC27A2O14975 620 aa5.81□□□□□ -1.48
SMC4-220ENST00000488017 ACO1P21399 889 aaKnown RBP5.81□□□□□ -1.48
SMC4-220ENST00000488017 GRIN1Q05586 938 aa5.81□□□□□ -1.48
SMC4-220ENST00000488017 PAN2Q504Q3 1202 aaKnown RBP5.81□□□□□ -1.48
SMC4-220ENST00000488017 SLC35F1Q5T1Q4 408 aa5.81□□□□□ -1.48
SMC4-220ENST00000488017 STPG3Q8N7X2 389 aa5.81□□□□□ -1.48
SMC4-220ENST00000488017 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.81□□□□□ -1.48
SMC4-220ENST00000488017 A0A087X1B8 175 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 CUTAO60888 179 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 PPFIA2O75334 1257 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 CR2P20023 1033 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 VAMP1P23763 118 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 GLRBP48167 497 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 MAMDC4Q6UXC1 1216 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 C1orf210Q8IVY1 113 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 GPR27Q9NS67 375 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 OAZ3Q9UMX2 235 aa5.8□□□□□ -1.48
SMC4-220ENST00000488017 SUSD5O60279 629 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 ZNF888P0CJ79 500 aaPredicted RBP5.79□□□□□ -1.48
SMC4-220ENST00000488017 ACRV1P26436 265 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 POLD1P28340 1107 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 DGCR2P98153 550 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 PFKPQ01813 784 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 MAP4K2Q12851 820 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 TUSC3Q13454 348 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 CD276Q5ZPR3 534 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 OTOP3Q7RTS5 596 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 FAM178BQ8IXR5 827 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 UHMK1Q8TAS1 419 aaKnown RBP5.79□□□□□ -1.48
SMC4-220ENST00000488017 CACTINQ8WUQ7 758 aaKnown RBP5.79□□□□□ -1.48
SMC4-220ENST00000488017 JAM3Q9BX67 310 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 MSL2Q9HCI7 577 aa5.79□□□□□ -1.48
SMC4-220ENST00000488017 ZNF839A8K0R7 811 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 RECKO95980 971 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 CAPNS1P04632 268 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 LMO1P25800 156 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 ZMAT1Q5H9K5 638 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 C6orf15Q6UXA7 325 aaPredicted RBP5.78□□□□□ -1.48
SMC4-220ENST00000488017 NEU4Q8WWR8 484 aaPredicted RBP5.78□□□□□ -1.48
SMC4-220ENST00000488017 VOPP1Q96AW1 172 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 ANAPC16Q96DE5 110 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 PTPN22Q9Y2R2 807 aa5.78□□□□□ -1.48
SMC4-220ENST00000488017 U2SURPO15042 1029 aaKnown RBP5.77□□□□□ -1.49
SMC4-220ENST00000488017 IL18BPO95998 194 aa5.77□□□□□ -1.49
SMC4-220ENST00000488017 C1SP09871 688 aa5.77□□□□□ -1.49
SMC4-220ENST00000488017 RSPO2Q6UXX9 243 aaPredicted RBP5.77□□□□□ -1.49
SMC4-220ENST00000488017 SCUBE1Q8IWY4 988 aa5.77□□□□□ -1.49
SMC4-220ENST00000488017 IL17DQ8TAD2 202 aa5.77□□□□□ -1.49
SMC4-220ENST00000488017 SCYL1Q96KG9 808 aa5.77□□□□□ -1.49
SMC4-220ENST00000488017 PLEKHG4BQ96PX9 1271 aa5.77□□□□□ -1.49
SMC4-220ENST00000488017 ADH4P08319 380 aa5.76□□□□□ -1.49
SMC4-220ENST00000488017 RPS19P39019 145 aaKnown RBP5.76□□□□□ -1.49
SMC4-220ENST00000488017 EPHA5P54756 1037 aa5.76□□□□□ -1.49
SMC4-220ENST00000488017 SPIRE1Q08AE8 756 aa5.76□□□□□ -1.49
SMC4-220ENST00000488017 TOP3AQ13472 1001 aaPredicted RBP5.76□□□□□ -1.49
SMC4-220ENST00000488017 RNF151Q2KHN1 245 aa5.76□□□□□ -1.49
SMC4-220ENST00000488017 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.76□□□□□ -1.49
SMC4-220ENST00000488017 LDLRAD3Q86YD5 345 aa5.76□□□□□ -1.49
SMC4-220ENST00000488017 KCTD13Q8WZ19 329 aa5.76□□□□□ -1.49
SMC4-220ENST00000488017 TACO1Q9BSH4 297 aaKnown RBP5.76□□□□□ -1.49
SMC4-220ENST00000488017 AURKAIP1Q9NWT8 199 aaPredicted RBP5.76□□□□□ -1.49
SMC4-220ENST00000488017 CDC14BO60729 498 aa5.75□□□□□ -1.49
SMC4-220ENST00000488017 DUSP8Q13202 625 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms