RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 UNC45AQ9H3U1 944 aa14.4□□□□□ -0.1
PRDM2-208ENST00000487453 C11orf49Q9H6J7 331 aa14.4□□□□□ -0.1
PRDM2-208ENST00000487453 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.4□□□□□ -0.1
PRDM2-208ENST00000487453 WDR64B1ANS9 1081 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 KPNA6O60684 536 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 BRD1O95696 1058 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 LGALS2P05162 132 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 PURAQ00577 322 aaKnown RBP14.39□□□□□ -0.11
PRDM2-208ENST00000487453 PTGDRQ13258 359 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 SF3A1Q15459 793 aaKnown RBP14.39□□□□□ -0.11
PRDM2-208ENST00000487453 NCAPH2Q6IBW4 605 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 CCSAPQ6IQ19 270 aaPredicted RBP14.39□□□□□ -0.11
PRDM2-208ENST00000487453 ZNF746Q6NUN9 644 aaPredicted RBP14.39□□□□□ -0.11
PRDM2-208ENST00000487453 MIS18BP1Q6P0N0 1132 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 NECAB2Q7Z6G3 386 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 TRIM50Q86XT4 487 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 SMAP1Q8IYB5 467 aaPredicted RBP14.39□□□□□ -0.11
PRDM2-208ENST00000487453 SEPT1Q8WYJ6 367 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 VTI1AQ96AJ9 217 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 MTG1Q9BT17 334 aaPredicted RBP14.39□□□□□ -0.11
PRDM2-208ENST00000487453 SENP6Q9GZR1 1112 aaPredicted RBP14.39□□□□□ -0.11
PRDM2-208ENST00000487453 TTC12Q9H892 705 aaPredicted RBP14.39□□□□□ -0.11
PRDM2-208ENST00000487453 PCDHA12Q9UN75 941 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 CEP131Q9UPN4 1083 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
PRDM2-208ENST00000487453 GSTTP1A0A1W2PQM5 241 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 LAD1O00515 517 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 BACH1O14867 736 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 PPFIA4O75335 1185 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 PSAPP07602 524 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 SFNP31947 248 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 MNX1P50219 401 aaPredicted RBP14.38□□□□□ -0.11
PRDM2-208ENST00000487453 JAK3P52333 1124 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 PSMC6P62333 389 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 NUCB2P80303 420 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 TMEM266Q2M3C6 531 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 MIER3Q7Z3K6 550 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 GLG1Q92896 1179 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 ZNF396Q96N95 335 aaPredicted RBP14.38□□□□□ -0.11
PRDM2-208ENST00000487453 MTMR9Q96QG7 549 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 AZI2Q9H6S1 392 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 STARD7Q9NQZ5 370 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 VAV3Q9UKW4 847 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 ZNF215Q9UL58 517 aaPredicted RBP14.38□□□□□ -0.11
PRDM2-208ENST00000487453 CLIC4Q9Y696 253 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 EMSYQ7Z589 1322 aa14.38□□□□□ -0.11
PRDM2-208ENST00000487453 POTEMA6NI47 508 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 CABYRO75952 493 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 BMP15O95972 392 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 F2P00734 622 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 SUPT20HL2P0C7V6 817 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 HOXD8P13378 290 aaPredicted RBP14.37□□□□□ -0.11
PRDM2-208ENST00000487453 MARK3P27448 753 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 DDIT3P35638 169 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 TECP42680 631 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 ATP2C1P98194 919 aaPredicted RBP14.37□□□□□ -0.11
PRDM2-208ENST00000487453 PPP2R5CQ13362 524 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 FAM160B1Q5W0V3 765 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 IPO9Q96P70 1041 aaKnown RBP14.37□□□□□ -0.11
PRDM2-208ENST00000487453 USP28Q96RU2 1077 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 KATNAL1Q9BW62 490 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 DISC1Q9NRI5 854 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 ZDHHC9Q9Y397 364 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 PCDHA10Q9Y5I2 948 aa14.37□□□□□ -0.11
PRDM2-208ENST00000487453 H3BRB1 525 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 COL6A1P12109 1028 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 NCLP19338 710 aaKnown RBP14.36□□□□□ -0.11
PRDM2-208ENST00000487453 ATN1P54259 1190 aaPredicted RBP14.36□□□□□ -0.11
PRDM2-208ENST00000487453 MFSD10Q14728 455 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 FAM47CQ5HY64 1035 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 SWSAP1Q6NVH7 229 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 DTHD1Q6ZMT9 781 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 CCDC60Q8IWA6 550 aaPredicted RBP14.36□□□□□ -0.11
PRDM2-208ENST00000487453 PPP1R13LQ8WUF5 828 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 C16orf70Q9BSU1 422 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 TUT1Q9H6E5 874 aaKnown RBP14.36□□□□□ -0.11
PRDM2-208ENST00000487453 ZNF302Q9NR11 478 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 ATP6V1DQ9Y5K8 247 aa14.36□□□□□ -0.11
PRDM2-208ENST00000487453 A0A0U1RQG5 324 aaPredicted RBP14.35□□□□□ -0.11
PRDM2-208ENST00000487453 VWA3AA6NCI4 1184 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 ATG7O95352 703 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 PRPHP41219 470 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 PSEN2P49810 448 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 STAT5BP51692 787 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 DNM1Q05193 864 aaKnown RBP14.35□□□□□ -0.11
PRDM2-208ENST00000487453 SPIRE1Q08AE8 756 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 ITGA7Q13683 1181 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 STK38Q15208 465 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 KIAA0753Q2KHM9 967 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 PDXDC2PQ6P474 469 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 B3GNT9Q6UX72 402 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 CKAP2LQ8IYA6 745 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 C4orf32Q8N8J7 132 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 BANK1Q8NDB2 785 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 RDM1Q8NG50 284 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 RAB34Q9BZG1 259 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 SMARCAD1Q9H4L7 1026 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 ERAP1Q9NZ08 941 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 TFIP11Q9UBB9 837 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms