RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C16orf70Q9BSU1 422 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 PUS7LQ9H0K6 701 aaKnown RBP13.8□□□□□ -0.2
TRIM56-204ENST00000487252 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 ISY1Q9ULR0 285 aaKnown RBP13.8□□□□□ -0.2
TRIM56-204ENST00000487252 C17orf102A2RUQ5 167 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 DCDC2BA2VCK2 349 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 SRGAP2BP0DMP2 458 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 ERICH6BQ5W0A0 696 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 PDE12Q6L8Q7 609 aaKnown RBP13.79□□□□□ -0.2
TRIM56-204ENST00000487252 SEPT14Q6ZU15 432 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 DNAJC2Q99543 621 aaKnown RBP13.79□□□□□ -0.2
TRIM56-204ENST00000487252 ADAM7Q9H2U9 754 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 ZNF287Q9HBT7 754 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 LIMD1Q9UGP4 676 aa13.79□□□□□ -0.2
TRIM56-204ENST00000487252 CHRNA1P02708 482 aa13.78□□□□□ -0.2
TRIM56-204ENST00000487252 SP9P0CG40 484 aa13.78□□□□□ -0.2
TRIM56-204ENST00000487252 ERVFC1P60507 584 aa13.78□□□□□ -0.2
TRIM56-204ENST00000487252 STRBPQ96SI9 672 aaKnown RBP13.78□□□□□ -0.2
TRIM56-204ENST00000487252 APOL5Q9BWW9 433 aa13.78□□□□□ -0.2
TRIM56-204ENST00000487252 RNPEPQ9H4A4 650 aa13.78□□□□□ -0.2
TRIM56-204ENST00000487252 USTQ9Y2C2 406 aa13.78□□□□□ -0.2
TRIM56-204ENST00000487252 CEP295Q9C0D2 2601 aa13.78□□□□□ -0.2
TRIM56-204ENST00000487252 MINDY4BA8MYZ0 360 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.21
TRIM56-204ENST00000487252 ADAM17P78536 824 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 LMNB2Q03252 620 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 ITIH3Q06033 890 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 MYSM1Q5VVJ2 828 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 LINC01599Q8WXQ3 324 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 CHMP4CQ96CF2 233 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRIM56-204ENST00000487252 PAG1Q9NWQ8 432 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 CACNA1IQ9P0X4 2223 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 CDV3Q9UKY7 258 aaKnown RBP13.77□□□□□ -0.21
TRIM56-204ENST00000487252 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
TRIM56-204ENST00000487252 DENND4AQ7Z401 1863 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 TSPY3P0CV98 308 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 TSPY8P0CW00 308 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 SMIM10L2AP0DMW4 78 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 SMIM10L2BP0DMW5 78 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 TRIM27P14373 513 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 TGM1P22735 817 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 NOVP48745 357 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 HSDL1Q3SXM5 330 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 VARS2Q5ST30 1063 aaKnown RBP13.76□□□□□ -0.21
TRIM56-204ENST00000487252 TTBK2Q6IQ55 1244 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 SIX5Q8N196 739 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 MICAL1Q8TDZ2 1067 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
TRIM56-204ENST00000487252 BORCS6Q96GS4 357 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 MAF1Q9H063 256 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 DLGAP2Q9P1A6 1054 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 DUSP12Q9UNI6 340 aa13.76□□□□□ -0.21
TRIM56-204ENST00000487252 GCN1Q92616 2671 aaKnown RBP13.76□□□□□ -0.21
TRIM56-204ENST00000487252 WDR19Q8NEZ3 1342 aa13.75□□□□□ -0.21
TRIM56-204ENST00000487252 SLC16A2P36021 539 aa13.75□□□□□ -0.21
TRIM56-204ENST00000487252 RARSP54136 660 aaKnown RBP13.75□□□□□ -0.21
TRIM56-204ENST00000487252 TFAP4Q01664 338 aa13.75□□□□□ -0.21
TRIM56-204ENST00000487252 COL9A3Q14050 684 aaPredicted RBP13.75□□□□□ -0.21
TRIM56-204ENST00000487252 LPIN1Q14693 890 aa13.75□□□□□ -0.21
TRIM56-204ENST00000487252 STXBP2Q15833 593 aa13.75□□□□□ -0.21
TRIM56-204ENST00000487252 SYDE2Q5VT97 1194 aa13.75□□□□□ -0.21
TRIM56-204ENST00000487252 RTN4RL1Q86UN2 441 aaPredicted RBP13.75□□□□□ -0.21
TRIM56-204ENST00000487252 TDRD5Q8NAT2 981 aaKnown RBP13.75□□□□□ -0.21
TRIM56-204ENST00000487252 IWS1Q96ST2 819 aa13.75□□□□□ -0.21
TRIM56-204ENST00000487252 EPB41L4AQ9HCS5 686 aaPredicted RBP13.75□□□□□ -0.21
TRIM56-204ENST00000487252 TNNQ9UQP3 1299 aa13.75□□□□□ -0.21
TRIM56-204ENST00000487252 ASH1LQ9NR48 2969 aaKnown RBP13.74□□□□□ -0.21
TRIM56-204ENST00000487252 H3BRB1 525 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 PPFIA3O75145 1194 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 GHRP10912 638 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 MTHFRP42898 656 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 MGAT3Q09327 533 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 TBC1D8BQ0IIM8 1120 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 TDGQ13569 410 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 CES5AQ6NT32 575 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 ERC1Q8IUD2 1116 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 NPAS4Q8IUM7 802 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 NSUN6Q8TEA1 469 aaKnown RBP13.74□□□□□ -0.21
TRIM56-204ENST00000487252 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 TUT1Q9H6E5 874 aaKnown RBP13.74□□□□□ -0.21
TRIM56-204ENST00000487252 IL17RBQ9NRM6 502 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 COL20A1Q9P218 1284 aa13.74□□□□□ -0.21
TRIM56-204ENST00000487252 EIF3JO75822 258 aaKnown RBP13.73□□□□□ -0.21
TRIM56-204ENST00000487252 FGF18O76093 207 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 DMWDQ09019 674 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 PPM1JQ5JR12 505 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 CELF3Q5SZQ8 465 aaKnown RBP13.73□□□□□ -0.21
TRIM56-204ENST00000487252 C1orf210Q8IVY1 113 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 MAML2Q8IZL2 1156 aaPredicted RBP13.73□□□□□ -0.21
TRIM56-204ENST00000487252 CASP10Q92851 521 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 TAAR1Q96RJ0 339 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 CYP26B1Q9NR63 512 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 WNT16Q9UBV4 365 aa13.73□□□□□ -0.21
TRIM56-204ENST00000487252 LZTS1Q9Y250 596 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms