RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 LINC01553A4QN01 128 aa23.96■■□□□ 1.43
LMBR1-217ENST00000485985 LGR5O75473 907 aa23.96■■□□□ 1.43
LMBR1-217ENST00000485985 SMIM10L2AP0DMW4 78 aa23.96■■□□□ 1.43
LMBR1-217ENST00000485985 SMIM10L2BP0DMW5 78 aa23.96■■□□□ 1.43
LMBR1-217ENST00000485985 FAM117BQ6P1L5 589 aa23.96■■□□□ 1.43
LMBR1-217ENST00000485985 EPHX3Q9H6B9 360 aa23.96■■□□□ 1.43
LMBR1-217ENST00000485985 ZBTB43O43298 467 aa23.95■■□□□ 1.42
LMBR1-217ENST00000485985 CPA1P15085 419 aa23.95■■□□□ 1.42
LMBR1-217ENST00000485985 ITGB5P18084 799 aa23.95■■□□□ 1.42
LMBR1-217ENST00000485985 SP4Q02446 784 aa23.95■■□□□ 1.42
LMBR1-217ENST00000485985 RTN1Q16799 776 aa23.95■■□□□ 1.42
LMBR1-217ENST00000485985 SYNE3Q6ZMZ3 975 aa23.95■■□□□ 1.42
LMBR1-217ENST00000485985 SENP7Q9BQF6 1050 aa23.95■■□□□ 1.42
LMBR1-217ENST00000485985 RBM28Q9NW13 759 aaKnown RBP23.95■■□□□ 1.42
LMBR1-217ENST00000485985 EMSYQ7Z589 1322 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 KLF18A0A0U1RQI7 1052 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 C17orf102A2RUQ5 167 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 ATP9AO75110 1047 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 KCNA2P16389 499 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 KRT32Q14532 448 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 NLRX1Q86UT6 975 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 GPRASP2Q96D09 838 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 CCDC136Q96JN2 1154 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 USP26Q9BXU7 913 aa23.94■■□□□ 1.42
LMBR1-217ENST00000485985 FAM217BQ9NTX9 383 aaPredicted RBP23.94■■□□□ 1.42
LMBR1-217ENST00000485985 TREHO43280 583 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 CDC27P30260 824 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 PLA2G5P39877 138 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.93■■□□□ 1.42
LMBR1-217ENST00000485985 KCNB2Q92953 911 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 ATP6V0A1Q93050 837 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 RNPEPQ9H4A4 650 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 PCDHA6Q9UN73 950 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 INSL6Q9Y581 213 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 PCDHA8Q9Y5H6 950 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 UBIAD1Q9Y5Z9 338 aa23.93■■□□□ 1.42
LMBR1-217ENST00000485985 LOXHD1Q8IVV2 1947 aa23.92■■□□□ 1.42
LMBR1-217ENST00000485985 SPDYE3A6NKU9 549 aa23.92■■□□□ 1.42
LMBR1-217ENST00000485985 GOLGA8AA7E2F4 631 aa23.92■■□□□ 1.42
LMBR1-217ENST00000485985 GOLGA8BA8MQT2 603 aa23.92■■□□□ 1.42
LMBR1-217ENST00000485985 RSPH10B2B2RC85 870 aa23.92■■□□□ 1.42
LMBR1-217ENST00000485985 RSPH10BP0C881 870 aa23.92■■□□□ 1.42
LMBR1-217ENST00000485985 THPOP40225 353 aa23.92■■□□□ 1.42
LMBR1-217ENST00000485985 MKRN4PQ13434 485 aaPredicted RBP23.92■■□□□ 1.42
LMBR1-217ENST00000485985 UTP14CQ5TAP6 766 aaKnown RBP23.92■■□□□ 1.42
LMBR1-217ENST00000485985 DBF4BQ8NFT6 615 aa23.92■■□□□ 1.42
LMBR1-217ENST00000485985 STXBP3O00186 592 aa23.91■■□□□ 1.42
LMBR1-217ENST00000485985 NAPAP54920 295 aa23.91■■□□□ 1.42
LMBR1-217ENST00000485985 MTMR1Q13613 665 aa23.91■■□□□ 1.42
LMBR1-217ENST00000485985 FAM122AQ96E09 287 aa23.91■■□□□ 1.42
LMBR1-217ENST00000485985 PGBD1Q96JS3 809 aa23.91■■□□□ 1.42
LMBR1-217ENST00000485985 LRFN3Q9BTN0 628 aa23.91■■□□□ 1.42
LMBR1-217ENST00000485985 SETD4Q9NVD3 440 aa23.91■■□□□ 1.42
LMBR1-217ENST00000485985 PKD2L1Q9P0L9 805 aa23.91■■□□□ 1.42
LMBR1-217ENST00000485985 WDR81Q562E7 1941 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 NLRC5Q86WI3 1866 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.9■■□□□ 1.42
LMBR1-217ENST00000485985 AMHP03971 560 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 HSPA4P34932 840 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 TCF7P36402 384 aaPredicted RBP23.9■■□□□ 1.42
LMBR1-217ENST00000485985 ADAM17P78536 824 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 PPP1R18Q6NYC8 613 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 GIMAP8Q8ND71 665 aaPredicted RBP23.9■■□□□ 1.42
LMBR1-217ENST00000485985 LMBR1Q8WVP7 490 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 CDHR1Q96JP9 859 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 C17orf80Q9BSJ5 609 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 UBE2ZQ9H832 354 aaPredicted RBP23.9■■□□□ 1.42
LMBR1-217ENST00000485985 RIC8AQ9NPQ8 531 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 ZNF215Q9UL58 517 aaPredicted RBP23.9■■□□□ 1.42
LMBR1-217ENST00000485985 SNX14Q9Y5W7 946 aa23.9■■□□□ 1.42
LMBR1-217ENST00000485985 V9GY48 417 aaPredicted RBP23.9■■□□□ 1.42
LMBR1-217ENST00000485985 HMGB1P09429 215 aaKnown RBP23.89■■□□□ 1.41
LMBR1-217ENST00000485985 RCAN1P53805 252 aa23.89■■□□□ 1.41
LMBR1-217ENST00000485985 HTRA4P83105 476 aaPredicted RBP23.89■■□□□ 1.41
LMBR1-217ENST00000485985 PLEKHG4Q58EX7 1191 aa23.89■■□□□ 1.41
LMBR1-217ENST00000485985 MYOCDQ8IZQ8 938 aa23.89■■□□□ 1.41
LMBR1-217ENST00000485985 KHSRPQ92945 711 aaKnown RBP eCLIP23.89■■□□□ 1.417e-7■■■□□ 15.4
LMBR1-217ENST00000485985 JAKMIP1Q96N16 626 aaKnown RBP23.89■■□□□ 1.41
LMBR1-217ENST00000485985 OSBPL7Q9BZF2 842 aa23.89■■□□□ 1.41
LMBR1-217ENST00000485985 GSTTP1A0A1W2PQM5 241 aa23.88■■□□□ 1.41
LMBR1-217ENST00000485985 CTSHP09668 335 aa23.88■■□□□ 1.41
LMBR1-217ENST00000485985 ADCY7P51828 1080 aa23.88■■□□□ 1.41
LMBR1-217ENST00000485985 APOBRQ0VD83 1088 aa23.88■■□□□ 1.41
LMBR1-217ENST00000485985 FBXO22Q8NEZ5 403 aa23.88■■□□□ 1.41
LMBR1-217ENST00000485985 SP7Q8TDD2 431 aaPredicted RBP23.88■■□□□ 1.41
LMBR1-217ENST00000485985 JADE2Q9NQC1 790 aa23.88■■□□□ 1.41
LMBR1-217ENST00000485985 NID2Q14112 1375 aa23.88■■□□□ 1.41
LMBR1-217ENST00000485985 hCG_1984214I3L0E3 225 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 TMEM31Q5JXX7 168 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 Q6ZUG5 572 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 ZNF713Q8N859 430 aaPredicted RBP23.87■■□□□ 1.41
LMBR1-217ENST00000485985 CYP2W1Q8TAV3 490 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 ANO3Q9BYT9 981 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 EHMT1Q9H9B1 1298 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 CD320Q9NPF0 282 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 TMEM260Q9NX78 707 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 BARHL2Q9NY43 387 aa23.87■■□□□ 1.41
LMBR1-217ENST00000485985 NAP1L2Q9ULW6 460 aaPredicted RBP23.87■■□□□ 1.41
LMBR1-217ENST00000485985 ADD1P35611 737 aaKnown RBP23.86■■□□□ 1.41
LMBR1-217ENST00000485985 METAP2P50579 478 aaKnown RBP eCLIP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms