RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 PDE1CQ14123 709 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 ZNF667Q5HYK9 610 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 SLC10A5Q5PT55 438 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 HP1BP3Q5SSJ5 553 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 YAF2Q8IY57 180 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 SRRM1Q8IYB3 904 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 UBE2TQ9NPD8 197 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 ZHX2Q9Y6X8 837 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 SPECC1L-ADORA2AF8WAN1 911 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 HIP1RO75146 1068 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 CLNS1AP54105 237 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 PTK2BQ14289 1009 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 RASGRP4Q8TDF6 673 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 P2RX5Q93086 422 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 ABCC12Q96J65 1359 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 SSH2Q76I76 1423 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 PHKA2P46019 1235 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 ZMYM1Q5SVZ6 1142 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 RSBN1LQ6PCB5 846 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 APOBEC3FQ8IUX4 373 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 FBXO18Q8NFZ0 1043 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 PNMA6FA0A0J9YX94 578 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 EFCAB8A8MWE9 144 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 HUS1O60921 280 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 SCARA5Q6ZMJ2 495 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 WRNIP1Q96S55 665 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 NT5C2P49902 561 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 MAN2A1Q16706 1144 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 PPP4R4Q6NUP7 873 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 EXOC4Q96A65 974 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 GBP5Q96PP8 586 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 MLH3Q9UHC1 1453 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 MYL1P05976 194 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 PAMP19021 973 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 CACNB1Q02641 598 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 LRRC41Q15345 812 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 THNSL1Q8IYQ7 743 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 ANKRD13CQ8N6S4 541 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 DESI2Q9BSY9 194 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 EFHD1Q9BUP0 239 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 LRRD1A4D1F6 860 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 APOA5Q6Q788 366 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 TRIM67Q6ZTA4 783 aa11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 CPSF2Q9P2I0 782 aaKnown RBP11.4□□□□□ -0.58
SRGAP3-207ENST00000485983 USP17L5A8MUK1 530 aa11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 ESRRBO95718 433 aa11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 ZBED1O96006 694 aa11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 DDIT3P35638 169 aa11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 MAPK6Q16659 721 aa11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 ERICH1Q86X53 443 aa11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 RBM46Q8TBY0 533 aaKnown RBP11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 PPWD1Q96BP3 646 aaKnown RBP11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 ATG3Q9NT62 314 aa11.4□□□□□ -0.59
SRGAP3-207ENST00000485983 OPHN1O60890 802 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ECEL1O95672 775 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ADD2P35612 726 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 PAPOLAP51003 745 aaKnown RBP11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 TTLL4Q14679 1199 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 KIAA1755Q5JYT7 1200 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ACBD5Q5T8D3 534 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 NLRP10Q86W26 655 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 LRRC43Q8N309 656 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 FBXL13Q8NEE6 735 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 LBHD1Q9BQE6 289 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ZNF212Q9UDV6 495 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 SRP68Q9UHB9 627 aaKnown RBP11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 DAAM1Q9Y4D1 1078 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 GH2P01242 217 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 APBA1Q02410 837 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 PSMD2Q13200 908 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 BEST2Q8NFU1 509 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 RAET1EQ8TD07 263 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 FIS1Q9Y3D6 152 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 RAD51Q06609 339 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ANKRD20A4Q4UJ75 823 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ANKRD20A8PQ5CZ79 823 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ANKRD20A2Q5SQ80 823 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ANKRD20A1Q5TYW2 823 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 TMTC3Q6ZXV5 915 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 ARHGEF25Q86VW2 580 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 MCPH1Q8NEM0 835 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 WHAMMQ8TF30 809 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 PPP2R2CQ9Y2T4 447 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 HNRNPCL2B2RXH8 293 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 HNRNPCL1O60812 293 aaKnown RBP11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 PPP6R2O75170 966 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 DNAJC8O75937 253 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 PLA2G4BP0C869 781 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 CDK8P49336 464 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 SNX1Q13596 522 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 VEPH1Q14D04 833 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 CC2D1AQ6P1N0 951 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
SRGAP3-207ENST00000485983 GCNT4Q9P109 453 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms