RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 MYBP10242 640 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 TRADDQ15628 312 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 ZC3H3Q8IXZ2 948 aaKnown RBP24.73■■□□□ 1.55
CLN5-202ENST00000485938 RNPC3Q96LT9 517 aaKnown RBP24.73■■□□□ 1.55
CLN5-202ENST00000485938 CD209Q9NNX6 404 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 GPCPD1Q9NPB8 672 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 PNMA6FA0A0J9YX94 578 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 ASIC2Q16515 512 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 CCDC65Q8IXS2 484 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 SCFD1Q8WVM8 642 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 NT5C3AQ9H0P0 336 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 JMJD4Q9H9V9 463 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 TMEM59LQ9UK28 342 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 RAD51CO43502 376 aa24.72■■□□□ 1.55
CLN5-202ENST00000485938 ZEB2O60315 1214 aa24.72■■□□□ 1.55
CLN5-202ENST00000485938 C1orf131Q8NDD1 294 aaKnown RBP24.72■■□□□ 1.55
CLN5-202ENST00000485938 FAM163AQ96GL9 167 aaPredicted RBP24.72■■□□□ 1.55
CLN5-202ENST00000485938 PCDHA12Q9UN75 941 aa24.72■■□□□ 1.55
CLN5-202ENST00000485938 MYH7BA7E2Y1 1941 aa24.72■■□□□ 1.55
CLN5-202ENST00000485938 KDM3AQ9Y4C1 1321 aa24.72■■□□□ 1.55
CLN5-202ENST00000485938 BTNL10A8MVZ5 291 aa24.72■■□□□ 1.55
CLN5-202ENST00000485938 E9PMD0 336 aa24.72■■□□□ 1.55
CLN5-202ENST00000485938 RNASE9P60153 205 aaKnown RBP24.72■■□□□ 1.55
CLN5-202ENST00000485938 IPO4Q8TEX9 1081 aaKnown RBP24.72■■□□□ 1.55
CLN5-202ENST00000485938 KAT2BQ92831 832 aa24.72■■□□□ 1.55
CLN5-202ENST00000485938 ATXN2Q99700 1313 aaKnown RBP24.71■■□□□ 1.55
CLN5-202ENST00000485938 NPHP3-ACAD11A0A0J9YXS1 232 aa24.71■■□□□ 1.55
CLN5-202ENST00000485938 CES2O00748 559 aa24.71■■□□□ 1.55
CLN5-202ENST00000485938 TNNC1P63316 161 aa24.71■■□□□ 1.55
CLN5-202ENST00000485938 ENOX2Q16206 610 aaKnown RBP24.71■■□□□ 1.55
CLN5-202ENST00000485938 B4GALNT4Q76KP1 1039 aa24.71■■□□□ 1.55
CLN5-202ENST00000485938 PTF1AQ7RTS3 328 aa24.71■■□□□ 1.55
CLN5-202ENST00000485938 AMIGO3Q86WK7 504 aa24.71■■□□□ 1.55
CLN5-202ENST00000485938 ADGRF4Q8IZF3 695 aa24.71■■□□□ 1.55
CLN5-202ENST00000485938 PLA2G4BP0C869 781 aa24.7■■□□□ 1.55
CLN5-202ENST00000485938 LSP1P33241 339 aa24.7■■□□□ 1.55
CLN5-202ENST00000485938 HSPA9P38646 679 aaKnown RBP24.7■■□□□ 1.55
CLN5-202ENST00000485938 GPSM2P81274 684 aa24.7■■□□□ 1.55
CLN5-202ENST00000485938 KIAA1024Q9UPX6 916 aa24.7■■□□□ 1.55
CLN5-202ENST00000485938 IGKV6D-41A0A0C4DH26 115 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 MARCH6O60337 910 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 GCFC2P16383 781 aaKnown RBP24.7■■□□□ 1.54
CLN5-202ENST00000485938 NR1D1P20393 614 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 CACNB1Q02641 598 aaPredicted RBP24.7■■□□□ 1.54
CLN5-202ENST00000485938 ADAM9Q13443 819 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 HERC4Q5GLZ8 1057 aaPredicted RBP24.7■■□□□ 1.54
CLN5-202ENST00000485938 MMS22LQ6ZRQ5 1243 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 CUL5Q93034 780 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 ATP6V1G3Q96LB4 118 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 EMILIN3Q9NT22 766 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 GAKO14976 1311 aa24.7■■□□□ 1.54
CLN5-202ENST00000485938 IL1R1P14778 569 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 INPP5BP32019 993 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 EIF6P56537 245 aaKnown RBP24.69■■□□□ 1.54
CLN5-202ENST00000485938 ZNF543Q08ER8 600 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 KCNH2Q12809 1159 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 GPBP1Q86WP2 473 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 CLEC10AQ8IUN9 316 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 TAF4BQ92750 862 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 EPN3Q9H201 632 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 POLD4Q9HCU8 107 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 AKR1B1P15121 316 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 GUCY1A3Q02108 690 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 RPS6KA1Q15418 735 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 EDRF1Q3B7T1 1238 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 DPY19L2P1Q6NXN4 242 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 SUGP1Q8IWZ8 645 aaKnown RBP24.69■■□□□ 1.54
CLN5-202ENST00000485938 KLHL7Q8IXQ5 586 aa24.69■■□□□ 1.54
CLN5-202ENST00000485938 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.69■■□□□ 1.54
CLN5-202ENST00000485938 ARHGEF1Q92888 912 aaKnown RBP24.69■■□□□ 1.54
CLN5-202ENST00000485938 TAF1DQ9H5J8 278 aaPredicted RBP24.69■■□□□ 1.54
CLN5-202ENST00000485938 MYH4Q9Y623 1939 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 CYP11B2P19099 503 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 EPS15P42566 896 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 PTK2Q05397 1052 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 C10orf76Q5T2E6 689 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 IRF2BP2Q7Z5L9 587 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 EIF1ADQ8N9N8 165 aaKnown RBP24.68■■□□□ 1.54
CLN5-202ENST00000485938 ARFGEF1Q9Y6D6 1849 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 POTEB3A0JP26 581 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 POTECB2RU33 542 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 KCNK3O14649 394 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 MRPL12P52815 198 aaKnown RBP24.68■■□□□ 1.54
CLN5-202ENST00000485938 GABPAQ06546 454 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 MFSD14BQ5SR56 506 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 POTEBQ6S5H4 581 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 ISCUQ9H1K1 167 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 PLAAQ9Y263 795 aa24.68■■□□□ 1.54
CLN5-202ENST00000485938 FOCADQ5VW36 1801 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 FRMD3A2A2Y4 597 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 HMGB1P1B2RPK0 211 aaPredicted RBP24.67■■□□□ 1.54
CLN5-202ENST00000485938 UFL1O94874 794 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 KIF4AO95239 1232 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 ACTN1P12814 892 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 USP11P51784 963 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 GTF2A1P52655 376 aaPredicted RBP24.67■■□□□ 1.54
CLN5-202ENST00000485938 ERVK-9P63128 1117 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 FAM182BQ5T319 152 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 DPP8Q6V1X1 898 aaPredicted RBP24.67■■□□□ 1.54
CLN5-202ENST00000485938 PPP4R3CPQ6ZMV5 832 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms