RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 ATP1A1P05023 1023 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 MYL1P05976 194 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 EPB42P16452 691 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 PRLRP16471 622 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 HOXB4P17483 251 aaPredicted RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 XBP1P17861 261 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 FGFR2P21802 821 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KRT9P35527 623 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KRT2P35908 639 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 USP8P40818 1118 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 IDH3AP50213 366 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KCNQ4P56696 695 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KRT83P78385 493 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 IFIT5Q13325 482 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KCNJ12Q14500 433 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 WTAPQ15007 396 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 NPY5RQ15761 445 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 SWI5Q1ZZU3 235 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 FIGNQ5HY92 759 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 METTL24Q5JXM2 366 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 ZNF658Q5TYW1 1059 aaPredicted RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 EMC10Q5UCC4 262 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 WWC2Q6AWC2 1192 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 EMBQ6PCB8 327 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 PI16Q6UXB8 463 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 LINC00114Q6XXX2 140 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KRT28Q7Z3Y7 464 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 SPATS2Q86XZ4 545 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 AMOTL1Q8IY63 956 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 CCDC170Q8IYT3 715 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 IFNL3Q8IZI9 196 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 ZNF654Q8IZM8 581 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 CNPY4Q8N129 248 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 ZBTB38Q8NAP3 1195 aaPredicted RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 FANCBQ8NB91 859 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 RETREG2Q8NC44 543 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 C1orf131Q8NDD1 294 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 OR8K1Q8NGG5 319 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 TTLL11Q8NHH1 800 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 ZNF507Q8TCN5 953 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 PBXIP1Q96AQ6 731 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 SHISA4Q96DD7 197 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 MMS19Q96T76 1030 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 SLF1Q9BQI6 1058 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 TACO1Q9BSH4 297 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 CRACR2AQ9BSW2 395 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 MYL10Q9BUA6 226 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 SELENOOQ9BVL4 669 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 TSGA10Q9BZW7 698 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 UBE2OQ9C0C9 1292 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 NAPBQ9H115 298 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 RNF41Q9H4P4 317 aaPredicted RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 THAP9Q9H5L6 903 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 A1CFQ9NQ94 594 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 ZSWIM5Q9P217 1185 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 ANAPC4Q9UJX5 808 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 CAPN11Q9UMQ6 739 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KCNJ14Q9UNX9 436 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 TACC3Q9Y6A5 838 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 A0A1W2PQJ5 194 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 GOLGA6CA6NDK9 693 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 GOLGA6BA6NDN3 693 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 GSG1L2A8MUP6 293 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 H7C1D1 291 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 EXOC5O00471 708 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 KRT86O43790 486 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 DDAH1O94760 285 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 MBD4O95243 580 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 ATG7O95352 703 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 ABL1P00519 1130 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 GOLGA6DP0CG33 693 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 SRGNP10124 158 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 PCP11498 1178 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 HNRNPH3P31942 346 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CYLC1P35663 651 aaPredicted RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CCT6AP40227 531 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 ADH7P40394 386 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 IRAK1P51617 712 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 VAV2P52735 878 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CTSWP56202 376 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 GSCP56915 257 aaPredicted RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 STX17P56962 302 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 AKAP17AQ02040 695 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 APBA1Q02410 837 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 ELOAQ14241 798 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 KCNB1Q14721 858 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 PUM3Q15397 648 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 SEC23AQ15436 765 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 PKN1Q16512 942 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 C11orf91Q3C1V1 193 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 TAF7LQ5H9L4 462 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 TTC38Q5R3I4 469 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 IER5Q5VY09 327 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 ALS2CLQ60I27 953 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 ARL6IP4Q66PJ3 421 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 KLHL10Q6JEL2 608 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CCDC70Q6NSX1 233 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 WDR59Q6PJI9 974 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CCNI2Q6ZMN8 369 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms