RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 TROAPQ12815 778 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 SEMA3FQ13275 785 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 FAM26DQ5JW98 314 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 PCNX4Q63HM2 1172 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 XRRA1Q6P2D8 792 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 NLRX1Q86UT6 975 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 GIMAP8Q8ND71 665 aaPredicted RBP15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 LMBR1Q8WVP7 490 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 PIBF1Q8WXW3 757 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 IL17RAQ96F46 866 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 SENP7Q9BQF6 1050 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 CLDND1Q9NY35 253 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 NCK2O43639 380 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 ADAM17P78536 824 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 TAF2Q6P1X5 1199 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 RSPH3Q86UC2 560 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 CTCFLQ8NI51 663 aaPredicted RBP15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 RRP36Q96EU6 259 aaKnown RBP15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 UIMC1Q96RL1 719 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 C11orf84Q9BUA3 381 aaPredicted RBP15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 OSBPL7Q9BZF2 842 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 LMAN2LQ9H0V9 348 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 SENP2Q9HC62 589 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 PRKAG3Q9UGI9 489 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 ADGRA3Q8IWK6 1321 aa15.83■□□□□ 0.12
SMARCD3-211ENST00000485592 ATG2AQ2TAZ0 1938 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 E7EWF7 191 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 C5orf67F2Z3F1 127 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 DCXO43602 365 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 RB1P06400 928 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 GHRP10912 638 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 KIF5BP33176 963 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 RPAINQ86UA6 219 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 CDHR1Q96JP9 859 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 SPZ1Q9BXG8 430 aa15.82■□□□□ 0.12
SMARCD3-211ENST00000485592 PIK3CDO00329 1044 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 GSPT1P15170 499 aaKnown RBP15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 TCF7P36402 384 aaPredicted RBP15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 PTH1RQ03431 593 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 PPFIA1Q13136 1202 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 COL19A1Q14993 1142 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 TTC22Q5TAA0 569 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 USP17L6PQ6QN14 398 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 GPRASP2Q96D09 838 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 MAP3K14Q99558 947 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 ERAP1Q9NZ08 941 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 TUBE1Q9UJT0 475 aa15.81■□□□□ 0.12
SMARCD3-211ENST00000485592 MEIS2O14770 477 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 DDAH1O94760 285 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 CHRNA1P02708 482 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 BMPR1AP36894 532 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 ZP2Q05996 745 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 RUFY4Q6ZNE9 571 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 ADHFE1Q8IWW8 467 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 EXOC6Q8TAG9 804 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 SEPT1Q8WYJ6 367 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 EHMT1Q9H9B1 1298 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 TELO2Q9Y4R8 837 aa15.8■□□□□ 0.12
SMARCD3-211ENST00000485592 RPLP2P05387 115 aaKnown RBP15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 MARK3P27448 753 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 SMARCA1P28370 1054 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 GNAQP50148 359 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 MGAT3Q09327 533 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 BTG3Q14201 252 aaPredicted RBP15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 LPIN1Q14693 890 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 GRIK4Q16099 956 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 CASC1Q6TDU7 716 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 TSHZ1Q6ZSZ6 1077 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 ZNF654Q8IZM8 581 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 IGDCC4Q8TDY8 1250 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 GLG1Q92896 1179 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 POP1Q99575 1024 aaKnown RBP15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 LZTS2Q9BRK4 669 aa15.79■□□□□ 0.12
SMARCD3-211ENST00000485592 GRM6O15303 877 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 KCNA2P16389 499 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 CHMLP26374 656 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 ANTXR2P58335 489 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 MTMR1Q13613 665 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 DNAJB3Q8WWF6 145 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 CLP1Q92989 425 aaKnown RBP15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 PPP2R3CQ969Q6 453 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 MYL10Q9BUA6 226 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 PLVAPQ9BX97 442 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 SMARCAD1Q9H4L7 1026 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 RC3H2Q9HBD1 1191 aaKnown RBP15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 CDY2AQ9Y6F7 541 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 TAF6LQ9Y6J9 622 aa15.78■□□□□ 0.12
SMARCD3-211ENST00000485592 POTEB3A0JP26 581 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 MBLAC1A4D2B0 266 aaPredicted RBP15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 C19orf67A6NJJ6 358 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 M0QZ92 97 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 ENPP3O14638 875 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 ATP9AO75110 1047 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 CSPG5O95196 566 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 MMP1P03956 469 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 LINC00271P0C7V0 271 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 HYAL1Q12794 435 aa15.77■□□□□ 0.12
SMARCD3-211ENST00000485592 CLUL1Q15846 466 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms