RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 MDM2Q00987 491 aaPredicted RBP22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 PNOCQ13519 176 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 ECM1Q16610 540 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 RDM1Q8NG50 284 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 APBA2Q99767 749 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 HSD17B14Q9BPX1 270 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 SLC9A2Q9UBY0 812 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 KIAA1024Q9UPX6 916 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 SAMM50Q9Y512 469 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 CCNE2O96020 404 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 MUTP22033 750 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 AFMP43652 599 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 PSMC4P43686 418 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 SP2Q02086 613 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 SP3Q02447 781 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 CYP4A11Q02928 519 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 NEDD9Q14511 834 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 LRSAM1Q6UWE0 723 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 SMAP1Q8IYB5 467 aaPredicted RBP22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 GRAMD1CQ8IYS0 662 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 KCTD17Q8N5Z5 321 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 KIAA1468Q9P260 1216 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 GJD2Q9UKL4 321 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 POTEFA5A3E0 1075 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 KIF22Q14807 665 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 POTEGQ6S5H5 508 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 SCFD2Q8WU76 684 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 LARP4BQ92615 738 aaKnown RBP22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 RAD54LQ92698 747 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 ERCC4Q92889 916 aaPredicted RBP22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 DYDC2Q96IM9 177 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 TRIM47Q96LD4 638 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 ARHGAP39Q9C0H5 1083 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 BLOC1S4Q9NUP1 217 aa22.91■■□□□ 1.26
VCPKMT-203ENST00000484763 PRR29P0C7W0 189 aa22.9■■□□□ 1.26
VCPKMT-203ENST00000484763 TTLL4Q14679 1199 aa22.9■■□□□ 1.26
VCPKMT-203ENST00000484763 KBTBD4Q9NVX7 518 aa22.9■■□□□ 1.26
VCPKMT-203ENST00000484763 RGL1Q9NZL6 768 aa22.9■■□□□ 1.26
VCPKMT-203ENST00000484763 DDX41Q9UJV9 622 aaKnown RBP22.9■■□□□ 1.26
VCPKMT-203ENST00000484763 SLITRK3O94933 977 aa22.89■■□□□ 1.26
VCPKMT-203ENST00000484763 SNAI1O95863 264 aaPredicted RBP22.89■■□□□ 1.26
VCPKMT-203ENST00000484763 CYP2B6P20813 491 aa22.89■■□□□ 1.26
VCPKMT-203ENST00000484763 CYFIP1Q7L576 1253 aa22.89■■□□□ 1.26
VCPKMT-203ENST00000484763 KCNK18Q7Z418 384 aa22.89■■□□□ 1.26
VCPKMT-203ENST00000484763 MTRQ99707 1265 aa22.89■■□□□ 1.26
VCPKMT-203ENST00000484763 KATNBL1Q9H079 304 aa22.89■■□□□ 1.26
VCPKMT-203ENST00000484763 LOXHD1Q8IVV2 1947 aa22.89■■□□□ 1.26
VCPKMT-203ENST00000484763 ARIH2O95376 493 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 MYL1P05976 194 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 P4HBP07237 508 aaKnown RBP22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 HSPA6P17066 643 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 CTTNQ14247 550 aaKnown RBP22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 OLFML2BQ68BL8 750 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 SASS6Q6UVJ0 657 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 TPH2Q8IWU9 490 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 STAMQ92783 540 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 LXNQ9BS40 222 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 ABHD16BQ9H3Z7 469 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 BCAS3Q9H6U6 928 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 SAGE1Q9NXZ1 904 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 PCDHA10Q9Y5I2 948 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 WDR81Q562E7 1941 aa22.89■■□□□ 1.25
VCPKMT-203ENST00000484763 GTPBP6O43824 516 aaPredicted RBP22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 FARP2O94887 1054 aaPredicted RBP22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 CCDC192P0DO97 292 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 LY6KQ17RY6 165 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 TAPT1Q6NXT6 567 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 CCDC62Q6P9F0 684 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 METTL7BQ6UX53 244 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 SV2BQ7L1I2 683 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 BANK1Q8NDB2 785 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 FUCA2Q9BTY2 467 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 TUBE1Q9UJT0 475 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 DNM3Q9UQ16 869 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 CASP8AP2Q9UKL3 1982 aa22.88■■□□□ 1.25
VCPKMT-203ENST00000484763 RBM47A0AV96 593 aaKnown RBP22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 E9PMD0 336 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 SMC2O95347 1197 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 GGPS1O95749 300 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 TXNP10599 105 aaKnown RBP22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 ACTR2P61160 394 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 AMPD3Q01432 767 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 MCM6Q14566 821 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 SMARCE1Q969G3 411 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 PDGFCQ9NRA1 345 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 PCDHA5Q9Y5H7 936 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 SORBS3O60504 671 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 PSAPP07602 524 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 SP4Q02446 784 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 DPYDQ12882 1025 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 IRF5Q13568 498 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 MLXIPQ9HAP2 919 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 FLRT1Q9NZU1 646 aa22.87■■□□□ 1.25
VCPKMT-203ENST00000484763 QARSP47897 775 aaKnown RBP22.86■■□□□ 1.25
VCPKMT-203ENST00000484763 TYRO3Q06418 890 aa22.86■■□□□ 1.25
VCPKMT-203ENST00000484763 ACVR2BQ13705 512 aa22.86■■□□□ 1.25
VCPKMT-203ENST00000484763 NT5DC1Q5TFE4 455 aa22.86■■□□□ 1.25
VCPKMT-203ENST00000484763 MIS18BP1Q6P0N0 1132 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms