RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PLA2G4DQ86XP0 818 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 FAM177A1Q8N128 213 aaPredicted RBP15.81■□□□□ 0.12
VARS-225ENST00000482996 GLG1Q92896 1179 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 RNPEPQ9H4A4 650 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 DOCK5Q9H7D0 1870 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 AGO4Q9HCK5 861 aaKnown RBP15.81■□□□□ 0.12
VARS-225ENST00000482996 CXXC1Q9P0U4 656 aaPredicted RBP15.81■□□□□ 0.12
VARS-225ENST00000482996 TELO2Q9Y4R8 837 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 GSTTP1A0A1W2PQM5 241 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 DNAJB2P25686 324 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 HOXC8P31273 242 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 SERINC5Q86VE9 423 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 VWCEQ96DN2 955 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 IL17RAQ96F46 866 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 FAM161BQ96MY7 647 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 C22orf23Q9BZE7 217 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 SEMA6BQ9H3T3 888 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 SMARCAD1Q9H4L7 1026 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 AZI2Q9H6S1 392 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 SETD4Q9NVD3 440 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 ERAP1Q9NZ08 941 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 MSRAQ9UJ68 235 aa15.8■□□□□ 0.12
VARS-225ENST00000482996 TRIP12Q14669 1992 aaPredicted RBP15.8■□□□□ 0.12
VARS-225ENST00000482996 NRCAMQ92823 1304 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 PFKFB2O60825 505 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 THPOP40225 353 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 AK2P54819 239 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 SETQ01105 290 aaPredicted RBP15.79■□□□□ 0.12
VARS-225ENST00000482996 SCRN1Q12765 414 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 HIC1Q14526 733 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 RAB30Q15771 203 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 TRIM71Q2Q1W2 868 aaKnown RBP15.79■□□□□ 0.12
VARS-225ENST00000482996 RASGRP4Q8TDF6 673 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 CRYGNQ8WXF5 182 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 TPCN1Q9ULQ1 816 aa15.79■□□□□ 0.12
VARS-225ENST00000482996 TANC1Q9C0D5 1861 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 EMSYQ7Z589 1322 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 GRXCR1A8MXD5 290 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 FAM86B1E9PN63 330 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 ADAMTS3O15072 1205 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 TREHO43280 583 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 LGR5O75473 907 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 FAM86B2P0C5J1 330 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 ATP2A2P16615 1042 aaKnown RBP15.78■□□□□ 0.12
VARS-225ENST00000482996 MARK3P27448 753 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 ACTR2P61160 394 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 PPFIA1Q13136 1202 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 ITGB3BPQ13352 177 aaPredicted RBP15.78■□□□□ 0.12
VARS-225ENST00000482996 ZNF618Q5T7W0 954 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 GALNT17Q6IS24 598 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 TNPO1Q92973 898 aaKnown RBP15.78■□□□□ 0.12
VARS-225ENST00000482996 WNT8BQ93098 351 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 PBX4Q9BYU1 374 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 TCEAL9Q9UHQ7 104 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 PCDHA4Q9UN74 947 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 STXBP5LQ9Y2K9 1186 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 SCN5AQ14524 2016 aa15.78■□□□□ 0.12
VARS-225ENST00000482996 STK36Q9NRP7 1315 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 IGLV3-22A0A075B6J6 115 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 RSPH10B2B2RC85 870 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 IPO5O00410 1097 aaKnown RBP15.77■□□□□ 0.12
VARS-225ENST00000482996 CAND2O75155 1236 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 BAIAP3O94812 1187 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 SEC24BO95487 1268 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 CXCL10P02778 98 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 RSPH10BP0C881 870 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 XBP1P17861 261 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 CIITAP33076 1130 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 NEK4P51957 841 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 CNKSR3Q6P9H4 555 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 BLIDQ8IZY5 108 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 LMBR1Q8WVP7 490 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 GUCD1Q96NT3 240 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 ZNF577Q9BSK1 485 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 TTYH1Q9H313 450 aaPredicted RBP15.77■□□□□ 0.12
VARS-225ENST00000482996 TBC1D22BQ9NU19 505 aa15.77■□□□□ 0.12
VARS-225ENST00000482996 DDX39AO00148 427 aaKnown RBP15.76■□□□□ 0.11
VARS-225ENST00000482996 PBX2P40425 430 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 KCNJ6P48051 423 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 USP11P51784 963 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 GRIK4Q16099 956 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 PRR16Q569H4 304 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 TAF2Q6P1X5 1199 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 PLPPR4Q7Z2D5 763 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 DAGLBQ8NCG7 672 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 WASF1Q92558 559 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 SLC9A7Q96T83 725 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 TRPC6Q9Y210 931 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 KAT6AQ92794 2004 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 TET1Q8NFU7 2136 aa15.76■□□□□ 0.11
VARS-225ENST00000482996 RRN3P2A6NIE6 340 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 BACH1O14867 736 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 NBNO60934 754 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 EFCAB14O75071 495 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 SLC26A2P50443 739 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 STAT5BP51692 787 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 ADAM17P78536 824 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 GPNMBQ14956 572 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 FAM160B1Q5W0V3 765 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms