RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ANKRD20A12PQ8NF67 263 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 DHTKD1Q96HY7 919 aaPredicted RBP16.04■□□□□ 0.16
CHD3-211ENST00000481999 SH2D3AQ9BRG2 576 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 TUBGCP2Q9BSJ2 902 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 ADGRG1Q9Y653 693 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 CYP3A4P08684 503 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 CEP55Q53EZ4 464 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 TMCO3Q6UWJ1 677 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 RAD9BQ6WBX8 426 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 CCDC47Q96A33 483 aaKnown RBP16.03■□□□□ 0.16
CHD3-211ENST00000481999 RUSC1Q9BVN2 902 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 NT5C3AQ9H0P0 336 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 MRPL44Q9H9J2 332 aaKnown RBP16.03■□□□□ 0.16
CHD3-211ENST00000481999 BRCA2P51587 3418 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
CHD3-211ENST00000481999 PPP2R3AQ06190 1150 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
CHD3-211ENST00000481999 CENPPQ6IPU0 288 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 DYDC2Q96IM9 177 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 REEP2Q9BRK0 252 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 SLC38A10Q9HBR0 1119 aa16.03■□□□□ 0.16
CHD3-211ENST00000481999 KDM3AQ9Y4C1 1321 aa16.02■□□□□ 0.16
CHD3-211ENST00000481999 PVALEFA0A1B0GWK0 134 aa16.02■□□□□ 0.16
CHD3-211ENST00000481999 GRIN3BO60391 1043 aa16.02■□□□□ 0.16
CHD3-211ENST00000481999 KRT18P05783 430 aaKnown RBP16.02■□□□□ 0.16
CHD3-211ENST00000481999 RPA1P27694 616 aa16.02■□□□□ 0.16
CHD3-211ENST00000481999 RPS6P62753 249 aaKnown RBP16.02■□□□□ 0.16
CHD3-211ENST00000481999 MIIPQ5JXC2 388 aa16.02■□□□□ 0.16
CHD3-211ENST00000481999 TAAR1Q96RJ0 339 aa16.02■□□□□ 0.16
CHD3-211ENST00000481999 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.16
CHD3-211ENST00000481999 IRX2Q9BZI1 471 aaPredicted RBP16.02■□□□□ 0.16
CHD3-211ENST00000481999 PLA2G6O60733 806 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 PSMD10O75832 226 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 ABL1P00519 1130 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 LMNB1P20700 586 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 FECHP22830 423 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 BACE1P56817 501 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 FAM26FQ5R3K3 315 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 HAUS3Q68CZ6 603 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 NSMFQ6X4W1 530 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 GPR161Q8N6U8 529 aaKnown RBP16.02■□□□□ 0.15
CHD3-211ENST00000481999 ZNF507Q8TCN5 953 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 LPAR1Q92633 364 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 FAM20AQ96MK3 541 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 ZNF577Q9BSK1 485 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 THAP9Q9H5L6 903 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 PPP1R9AQ9ULJ8 1098 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 PCDHA2Q9Y5H9 948 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 FHOD1Q9Y613 1164 aa16.02■□□□□ 0.15
CHD3-211ENST00000481999 TTC26A0AVF1 554 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 ADM5C9JUS6 153 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 TBX3O15119 743 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 KIF5CO60282 957 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 SLITRK3O94933 977 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 KCNA1Q09470 495 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 TRIM14Q14142 442 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 MB21D1Q8N884 522 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 BANK1Q8NDB2 785 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 UNC45AQ9H3U1 944 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 AGPAT5Q9NUQ2 364 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 RASSF10A6NK89 507 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 LGALS16A8MUM7 142 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 VWA5AO00534 786 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 GAS7O60861 476 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHD3-211ENST00000481999 PNMA6AP0CW24 399 aaPredicted RBP16.01■□□□□ 0.15
CHD3-211ENST00000481999 MTIF2P46199 727 aaKnown RBP16.01■□□□□ 0.15
CHD3-211ENST00000481999 HSD17B4P51659 736 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 ERVK-24P63145 666 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 MRPS9P82933 396 aaKnown RBP16.01■□□□□ 0.15
CHD3-211ENST00000481999 GPC2Q8N158 579 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 ZNF280CQ8ND82 737 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 SCFD1Q8WVM8 642 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 KLRG1Q96E93 195 aa16.01■□□□□ 0.15
CHD3-211ENST00000481999 MAGEC2Q9UBF1 373 aaPredicted RBP16.01■□□□□ 0.15
CHD3-211ENST00000481999 TMEM150BA6NC51 233 aa16■□□□□ 0.15
CHD3-211ENST00000481999 IPO5O00410 1097 aaKnown RBP16■□□□□ 0.15
CHD3-211ENST00000481999 GIT2Q14161 759 aa16■□□□□ 0.15
CHD3-211ENST00000481999 TMTC1Q8IUR5 882 aa16■□□□□ 0.15
CHD3-211ENST00000481999 CHP1Q99653 195 aa16■□□□□ 0.15
CHD3-211ENST00000481999 LZTFL1Q9NQ48 299 aa16■□□□□ 0.15
CHD3-211ENST00000481999 PICK1Q9NRD5 415 aa16■□□□□ 0.15
CHD3-211ENST00000481999 KCNH7Q9NS40 1196 aa16■□□□□ 0.15
CHD3-211ENST00000481999 RNF181Q9P0P0 153 aa16■□□□□ 0.15
CHD3-211ENST00000481999 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
CHD3-211ENST00000481999 DNM3Q9UQ16 869 aa16■□□□□ 0.15
CHD3-211ENST00000481999 COL11A1P12107 1806 aaPredicted RBP16■□□□□ 0.15
CHD3-211ENST00000481999 DOCK1Q14185 1865 aa16■□□□□ 0.15
CHD3-211ENST00000481999 BICDL2A1A5D9 508 aa16■□□□□ 0.15
CHD3-211ENST00000481999 EPHB6O15197 1021 aa16■□□□□ 0.15
CHD3-211ENST00000481999 ATP8B1O43520 1251 aa16■□□□□ 0.15
CHD3-211ENST00000481999 EEF1GP26641 437 aaKnown RBP16■□□□□ 0.15
CHD3-211ENST00000481999 TERF2Q15554 542 aa16■□□□□ 0.15
CHD3-211ENST00000481999 LRRC55Q6ZSA7 311 aa16■□□□□ 0.15
CHD3-211ENST00000481999 MOB2Q70IA6 237 aa16■□□□□ 0.15
CHD3-211ENST00000481999 RSRC2Q7L4I2 434 aaKnown RBP16■□□□□ 0.15
CHD3-211ENST00000481999 SFR1Q86XK3 245 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms