RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 ARHGAP4P98171 946 aa25.42■■□□□ 1.66
GPCPD1-206ENST00000481690 MICALL1Q8N3F8 863 aa25.42■■□□□ 1.66
GPCPD1-206ENST00000481690 ZNF713Q8N859 430 aaPredicted RBP25.42■■□□□ 1.66
GPCPD1-206ENST00000481690 KCNB2Q92953 911 aa25.42■■□□□ 1.66
GPCPD1-206ENST00000481690 BRF1Q92994 677 aa25.42■■□□□ 1.66
GPCPD1-206ENST00000481690 FAM217BQ9NTX9 383 aaPredicted RBP25.42■■□□□ 1.66
GPCPD1-206ENST00000481690 ABHD14A-ACY1A0A1B0GW23 586 aa25.41■■□□□ 1.66
GPCPD1-206ENST00000481690 SMCO2A6NFE2 343 aa25.41■■□□□ 1.66
GPCPD1-206ENST00000481690 RCAN1P53805 252 aa25.41■■□□□ 1.66
GPCPD1-206ENST00000481690 IKBKEQ14164 716 aa25.41■■□□□ 1.66
GPCPD1-206ENST00000481690 SEPT1Q8WYJ6 367 aa25.41■■□□□ 1.66
GPCPD1-206ENST00000481690 ANO3Q9BYT9 981 aa25.41■■□□□ 1.66
GPCPD1-206ENST00000481690 PRDM6Q9NQX0 595 aa25.41■■□□□ 1.66
GPCPD1-206ENST00000481690 BARHL2Q9NY43 387 aa25.41■■□□□ 1.66
GPCPD1-206ENST00000481690 COL4A4P53420 1690 aaPredicted RBP25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 EFCAB14O75071 495 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 ARHGEF15O94989 841 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 REC8O95072 547 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 NEFLP07196 543 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 MARK3P27448 753 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 ADD1P35611 737 aaKnown RBP25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 LMBR1Q8WVP7 490 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 ARNTL2Q8WYA1 636 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 TMEM260Q9NX78 707 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 A0A0C4DFX4 3053 aa25.4■■□□□ 1.66
GPCPD1-206ENST00000481690 CCDC196A0A1B0GTZ2 297 aa25.39■■□□□ 1.66
GPCPD1-206ENST00000481690 GSTTP1A0A1W2PQM5 241 aa25.39■■□□□ 1.66
GPCPD1-206ENST00000481690 RFXAPO00287 272 aa25.39■■□□□ 1.66
GPCPD1-206ENST00000481690 FOSP01100 380 aaPredicted RBP25.39■■□□□ 1.66
GPCPD1-206ENST00000481690 TAP1Q03518 808 aa25.39■■□□□ 1.66
GPCPD1-206ENST00000481690 GLG1Q92896 1179 aa25.39■■□□□ 1.66
GPCPD1-206ENST00000481690 MXRA8Q9BRK3 442 aa25.39■■□□□ 1.66
GPCPD1-206ENST00000481690 PRUNE2Q8WUY3 3088 aa25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 MAFGO15525 162 aa25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 CAND2O75155 1236 aa25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 FAM117BQ6P1L5 589 aa25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 DBF4BQ8NFT6 615 aa25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 CYP2W1Q8TAV3 490 aa25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 GLT8D2Q9H1C3 349 aa25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 JPH1Q9HDC5 661 aaPredicted RBP25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 ERAP1Q9NZ08 941 aa25.38■■□□□ 1.65
GPCPD1-206ENST00000481690 NRCAMQ92823 1304 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 SIP14410 1827 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 CHD7Q9P2D1 2997 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 LCHNA4D1U4 455 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 EPOPA6NHQ4 379 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 RPS6KB1P23443 525 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 PPFIA1Q13136 1202 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 AP3B2Q13367 1082 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 PFKFB3Q16875 520 aaPredicted RBP25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 KCNH7Q9NS40 1196 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 SLC9A2Q9UBY0 812 aa25.37■■□□□ 1.65
GPCPD1-206ENST00000481690 SCG2P13521 617 aa25.36■■□□□ 1.65
GPCPD1-206ENST00000481690 PSMA5P28066 241 aa25.36■■□□□ 1.65
GPCPD1-206ENST00000481690 ADAM17P78536 824 aa25.36■■□□□ 1.65
GPCPD1-206ENST00000481690 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.36■■□□□ 1.65
GPCPD1-206ENST00000481690 TEX2Q8IWB9 1127 aa25.36■■□□□ 1.65
GPCPD1-206ENST00000481690 SDF4Q9BRK5 362 aa25.36■■□□□ 1.65
GPCPD1-206ENST00000481690 SMARCAD1Q9H4L7 1026 aa25.36■■□□□ 1.65
GPCPD1-206ENST00000481690 GTPBP6O43824 516 aaPredicted RBP25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 GJB5O95377 273 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 ARP10275 920 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 ZNF76P36508 570 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 GRIK4Q16099 956 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 CEP55Q53EZ4 464 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 PLEKHG4Q58EX7 1191 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 JAKMIP3Q5VZ66 844 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 SPRED2Q7Z698 418 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 MYOCDQ8IZQ8 938 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 SEPT8Q92599 483 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 THEGQ9P2T0 379 aa25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 PRRC2BQ5JSZ5 2229 aaKnown RBP25.35■■□□□ 1.65
GPCPD1-206ENST00000481690 NID2Q14112 1375 aa25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 AMHP03971 560 aa25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 SREBF1P36956 1147 aa25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 CLK2P49760 499 aaKnown RBP25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 RUFY4Q6ZNE9 571 aa25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 RAD9AQ99638 391 aa25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 OSBPL7Q9BZF2 842 aa25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 AZI2Q9H6S1 392 aa25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 TUBE1Q9UJT0 475 aa25.34■■□□□ 1.65
GPCPD1-206ENST00000481690 PPFIA3O75145 1194 aa25.33■■□□□ 1.65
GPCPD1-206ENST00000481690 IGBP1P78318 339 aa25.33■■□□□ 1.65
GPCPD1-206ENST00000481690 AKAP17AQ02040 695 aaKnown RBP25.33■■□□□ 1.65
GPCPD1-206ENST00000481690 TJAP1Q5JTD0 557 aa25.33■■□□□ 1.65
GPCPD1-206ENST00000481690 PHKBQ93100 1093 aa25.33■■□□□ 1.65
GPCPD1-206ENST00000481690 AGO4Q9HCK5 861 aaKnown RBP25.33■■□□□ 1.65
GPCPD1-206ENST00000481690 NFASCO94856 1347 aa25.33■■□□□ 1.64
GPCPD1-206ENST00000481690 ACTR2P61160 394 aa25.32■■□□□ 1.64
GPCPD1-206ENST00000481690 ITGB3BPQ13352 177 aaPredicted RBP25.32■■□□□ 1.64
GPCPD1-206ENST00000481690 SKIV2LQ15477 1246 aaKnown RBP25.32■■□□□ 1.64
GPCPD1-206ENST00000481690 TAF2Q6P1X5 1199 aa25.32■■□□□ 1.64
GPCPD1-206ENST00000481690 CCDC12Q8WUD4 166 aaPredicted RBP25.32■■□□□ 1.64
GPCPD1-206ENST00000481690 SYMPKQ92797 1274 aaKnown RBP25.32■■□□□ 1.64
GPCPD1-206ENST00000481690 MTUS1Q9ULD2 1270 aa25.32■■□□□ 1.64
GPCPD1-206ENST00000481690 MTCH2Q9Y6C9 303 aa25.32■■□□□ 1.64
GPCPD1-206ENST00000481690 DDX39AO00148 427 aaKnown RBP25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 PRPF3O43395 683 aaKnown RBP25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 KRT40Q6A162 431 aa25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 RSPH3Q86UC2 560 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms