RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ACTN4O43707 911 aaKnown RBP11.39□□□□□ -0.59
USP39-215ENST00000481409 TRPA1O75762 1119 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 ATG7O95352 703 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 CAVIN2O95810 425 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 IGHA2P01877 340 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 PSAPP07602 524 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 CCT6AP40227 531 aaKnown RBP11.39□□□□□ -0.59
USP39-215ENST00000481409 ITGB3BPQ13352 177 aaPredicted RBP11.39□□□□□ -0.59
USP39-215ENST00000481409 SPECC1Q5M775 1068 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 MIS18BP1Q6P0N0 1132 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 CNNM4Q6P4Q7 775 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 CCDC62Q6P9F0 684 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 SEPT14Q6ZU15 432 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 USP49Q70CQ1 688 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 SH3RF1Q7Z6J0 888 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 ATP6V0A1Q93050 837 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
USP39-215ENST00000481409 EIF2AK1Q9BQI3 630 aaKnown RBP11.39□□□□□ -0.59
USP39-215ENST00000481409 UNC45AQ9H3U1 944 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 R3HDMLQ9H3Y0 253 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 ZSWIM4Q9H7M6 989 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 KCND2Q9NZV8 630 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
USP39-215ENST00000481409 Q9Y3F1 56 aa11.39□□□□□ -0.59
USP39-215ENST00000481409 FKTNO75072 461 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 ATP9AO75110 1047 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 SMC2O95347 1197 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 TBC1D8O95759 1140 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 SNAI1O95863 264 aaPredicted RBP11.38□□□□□ -0.59
USP39-215ENST00000481409 PLCG1P19174 1290 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 QARSP47897 775 aaKnown RBP11.38□□□□□ -0.59
USP39-215ENST00000481409 ZNF445P59923 1031 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 PSMC5P62195 406 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 ACVR2BQ13705 512 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 LAMC2Q13753 1193 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 KARSQ15046 597 aaKnown RBP11.38□□□□□ -0.59
USP39-215ENST00000481409 LONRF3Q496Y0 759 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 CELF3Q5SZQ8 465 aaKnown RBP11.38□□□□□ -0.59
USP39-215ENST00000481409 PDXDC2PQ6P474 469 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 SV2BQ7L1I2 683 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 CATSPER3Q86XQ3 398 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 C4orf19Q8IY42 314 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 PDILTQ8N807 584 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 TRIML1Q8N9V2 468 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 NPLOC4Q8TAT6 608 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 LARP4BQ92615 738 aaKnown RBP11.38□□□□□ -0.59
USP39-215ENST00000481409 DHX58Q96C10 678 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 GSDMAQ96QA5 445 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 NACC1Q96RE7 527 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 KATNBL1Q9H079 304 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
USP39-215ENST00000481409 KBTBD4Q9NVX7 518 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 DNM3Q9UQ16 869 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 PPME1Q9Y570 386 aa11.38□□□□□ -0.59
USP39-215ENST00000481409 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
USP39-215ENST00000481409 FARP2O94887 1054 aaPredicted RBP11.37□□□□□ -0.59
USP39-215ENST00000481409 SLITRK3O94933 977 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 SPATA31C1P0DKV0 1188 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 TXNP10599 105 aaKnown RBP11.37□□□□□ -0.59
USP39-215ENST00000481409 UBA1P22314 1058 aaKnown RBP11.37□□□□□ -0.59
USP39-215ENST00000481409 SLC26A2P50443 739 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 MDM2Q00987 491 aaPredicted RBP11.37□□□□□ -0.59
USP39-215ENST00000481409 GRB10Q13322 594 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 POSTNQ15063 836 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 ZRSR1Q15695 479 aaKnown RBP11.37□□□□□ -0.59
USP39-215ENST00000481409 ZSCAN23Q3MJ62 389 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 DUSP28Q4G0W2 176 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 CT47A1Q5JQC4 288 aaPredicted RBP11.37□□□□□ -0.59
USP39-215ENST00000481409 NT5DC1Q5TFE4 455 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 MFSD14CQ5VZR4 134 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 TAPT1Q6NXT6 567 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 SPATA20Q8TB22 786 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 SEPT1Q8WYJ6 367 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 CCDC47Q96A33 483 aaKnown RBP11.37□□□□□ -0.59
USP39-215ENST00000481409 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 PNMA5Q96PV4 448 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 TIPINQ9BVW5 301 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 MLXIPQ9HAP2 919 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 RMND1Q9NWS8 449 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 KIAA1468Q9P260 1216 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 SERTAD1Q9UHV2 236 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 SAMM50Q9Y512 469 aa11.37□□□□□ -0.59
USP39-215ENST00000481409 DOCK3Q8IZD9 2030 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 A0A087X0B3 334 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 IGKV6D-21A0A0A0MT36 114 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 PP2D1A8MPX8 630 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 EML1O00423 815 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 MED24O75448 989 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 EYA4O95677 639 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 GGPS1O95749 300 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 GH1P01241 217 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 CCDC192P0DO97 292 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 CDC25AP30304 524 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 ACTR2P61160 394 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 NAALADL2Q58DX5 795 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 FAM160B1Q5W0V3 765 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 SASS6Q6UVJ0 657 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 ABHD15Q6UXT9 468 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 OTUD6AQ7L8S5 288 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms