RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ELF4Q99607 663 aaPredicted RBP7.11□□□□□ -1.27
UPF3A-207ENST00000481131 PUS7LQ9H0K6 701 aaKnown RBP7.11□□□□□ -1.27
UPF3A-207ENST00000481131 B3GALT1Q9Y5Z6 326 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 DCAF1Q9Y4B6 1507 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 A0A1W2PQJ5 194 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 H7C1D1 291 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 SCDO00767 359 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 HGSO14964 777 aaPredicted RBP7.1□□□□□ -1.27
UPF3A-207ENST00000481131 MARCH6O60337 910 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 CLASP2O75122 1294 aaKnown RBP7.1□□□□□ -1.27
UPF3A-207ENST00000481131 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
UPF3A-207ENST00000481131 EPHA5P54756 1037 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 FYB2Q5VWT5 728 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 CYP4F22Q6NT55 531 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 KCTD1Q719H9 257 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 DCP2Q8IU60 420 aaKnown RBP7.1□□□□□ -1.27
UPF3A-207ENST00000481131 KIAA1958Q8N8K9 716 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 CLRN3Q8NCR9 226 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 FLAD1Q8NFF5 587 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 JDP2Q8WYK2 163 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 SEC14L1Q92503 715 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 SMOC1Q9H4F8 434 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 MYOTQ9UBF9 498 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 ASH2LQ9UBL3 628 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 PALD1Q9ULE6 856 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 ZNF652Q9Y2D9 606 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 MYO15BQ96JP2 1530 aa7.1□□□□□ -1.27
UPF3A-207ENST00000481131 ZC3H12DA2A288 527 aaKnown RBP7.09□□□□□ -1.27
UPF3A-207ENST00000481131 FAM90A27PA6NNH2 459 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 ALDH1L1O75891 902 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 ERVFRD-1P60508 538 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 OCRLQ01968 901 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 ITKQ08881 620 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 TUSC3Q13454 348 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 CABP7Q86V35 215 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 C11orf74Q86VG3 221 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 ABHD4Q8TB40 342 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 CLEC4DQ8WXI8 215 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 SLC5A5Q92911 643 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 MS4A5Q9H3V2 200 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 YBX2Q9Y2T7 364 aaKnown RBP7.09□□□□□ -1.27
UPF3A-207ENST00000481131 PCDHB4Q9Y5E5 795 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 SPO11Q9Y5K1 396 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 HCFC2Q9Y5Z7 792 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 ATP23Q9Y6H3 246 aa7.09□□□□□ -1.27
UPF3A-207ENST00000481131 TCRBV5S2A0A599 114 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 K7ESF4 209 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 GABRDO14764 452 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 C4BPAP04003 597 aaKnown RBP7.08□□□□□ -1.28
UPF3A-207ENST00000481131 CYBBP04839 570 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 PTX3P26022 381 aaPredicted RBP7.08□□□□□ -1.28
UPF3A-207ENST00000481131 KIF11P52732 1056 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 ERVK-21P61565 698 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 SMAD3P84022 425 aaKnown RBP7.08□□□□□ -1.28
UPF3A-207ENST00000481131 SMAD2Q15796 467 aaKnown RBP7.08□□□□□ -1.28
UPF3A-207ENST00000481131 CHRNA2Q15822 529 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 IQSEC1Q6DN90 963 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 HDGFL2Q7Z4V5 671 aaPredicted RBP7.08□□□□□ -1.28
UPF3A-207ENST00000481131 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.08□□□□□ -1.28
UPF3A-207ENST00000481131 NLGN4XQ8N0W4 816 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 CBARPQ8N350 705 aaPredicted RBP7.08□□□□□ -1.28
UPF3A-207ENST00000481131 PDGFDQ9GZP0 370 aaPredicted RBP7.08□□□□□ -1.28
UPF3A-207ENST00000481131 ZMAT4Q9H898 229 aa7.08□□□□□ -1.28
UPF3A-207ENST00000481131 PTPN1P18031 435 aaKnown RBP7.07□□□□□ -1.28
UPF3A-207ENST00000481131 ARL4AP40617 200 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 MCL1Q07820 350 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 TTF1Q15361 905 aaPredicted RBP7.07□□□□□ -1.28
UPF3A-207ENST00000481131 TERF2Q15554 542 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 DDB1Q16531 1140 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 SYDE2Q5VT97 1194 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 BROXQ5VW32 411 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 ESRP1Q6NXG1 681 aaKnown RBP7.07□□□□□ -1.28
UPF3A-207ENST00000481131 PAQR3Q6TCH7 311 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 ARRDC4Q8NCT1 418 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 PHOSPHO1Q8TCT1 267 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 SMAD5Q99717 465 aaKnown RBP7.07□□□□□ -1.28
UPF3A-207ENST00000481131 AP5M1Q9H0R1 490 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 RNF114Q9Y508 228 aa7.07□□□□□ -1.28
UPF3A-207ENST00000481131 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.06□□□□□ -1.28
UPF3A-207ENST00000481131 LCHNA4D1U4 455 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 RASSF10A6NK89 507 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 F8W031 263 aaPredicted RBP7.06□□□□□ -1.28
UPF3A-207ENST00000481131 ACOT7O00154 380 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
UPF3A-207ENST00000481131 MAFKO60675 156 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 HIP1RO75146 1068 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 ULK1O75385 1050 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 ITGB5P18084 799 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 SESN3P58005 492 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 GRIN1Q05586 938 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 ZNF174Q15697 407 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 CATSPEREQ5SY80 951 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 CC2D1AQ6P1N0 951 aaPredicted RBP7.06□□□□□ -1.28
UPF3A-207ENST00000481131 RPTNQ6XPR3 784 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 MILR1Q7Z6M3 343 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 PEX11GQ96HA9 241 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 YIPF4Q9BSR8 244 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 PCIF1Q9H4Z3 704 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 KCNH7Q9NS40 1196 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms