RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 SCINQ9Y6U3 715 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 TIAM2Q8IVF5 1701 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 TNKSO95271 1327 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 FAM205AQ6ZU69 1335 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 PNPLA7Q6ZV29 1317 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 LGALS16A8MUM7 142 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 BACH1O14867 736 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 ABCB7O75027 752 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 RPSAP08865 295 aaKnown RBP11.15□□□□□ -0.62
COMMD4-203ENST00000480484 FAM153BP0C7A2 387 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 CARSP49589 748 aaKnown RBP11.15□□□□□ -0.62
COMMD4-203ENST00000480484 FAM153CQ494X1 144 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 HAUS3Q68CZ6 603 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 EPAS1Q99814 870 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 NACAP1Q9BZK3 213 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 KRT23Q9C075 422 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 RSPH9Q9H1X1 276 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-203ENST00000480484 A1CFQ9NQ94 594 aaKnown RBP11.15□□□□□ -0.62
COMMD4-203ENST00000480484 FAM153AQ9UHL3 310 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
COMMD4-203ENST00000480484 MAGEB6P1A0A0J9YX57 407 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 A6NNZ2 444 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 ZNF263O14978 683 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 RPN1P04843 607 aaKnown RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 EPB41P11171 864 aaKnown RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 SMTNP53814 917 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 CLNS1AP54105 237 aaKnown RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 GUCY2DQ02846 1103 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 TBC1D8BQ0IIM8 1120 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 PTGISQ16647 500 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 TUBB8Q3ZCM7 444 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 PREPLQ4J6C6 727 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 C1QTNF12Q5T7M4 302 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 MYCBPAPQ8TBZ2 947 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 OSBPL9Q96SU4 736 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 FAM126AQ9BYI3 521 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 ZHX3Q9H4I2 956 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 ZNF233A6NK53 670 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 USO1O60763 962 aaKnown RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 USP17L8P0C7I0 530 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 XBP1P17861 261 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 KRT2P35908 639 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 SNCBQ16143 134 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 ZNF658Q5TYW1 1059 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 LRCH2Q5VUJ6 765 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 ENAHQ8N8S7 591 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 TRIM58Q8NG06 486 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 MS4A14Q96JA4 679 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 IFIH1Q9BYX4 1025 aaKnown RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 CNNM2Q9H8M5 875 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 EPB41L5Q9HCM4 733 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 NUB1Q9Y5A7 615 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 ZNF804BA4D1E1 1349 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 H7C1D1 291 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 FOSP01100 380 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 NOC3LQ8WTT2 800 aaKnown RBP11.14□□□□□ -0.63
COMMD4-203ENST00000480484 FERMT2Q96AC1 680 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 HAUS2Q9NVX0 235 aa11.14□□□□□ -0.63
COMMD4-203ENST00000480484 RTL9Q8NET4 1388 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 TTC38Q5R3I4 469 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 KDM7AQ6ZMT4 941 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 NAP1L4Q99733 375 aaKnown RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 C21orf2O43822 256 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 GLI1P08151 1106 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 SATB1Q01826 763 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 SIM2Q14190 667 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 NAA25Q14CX7 972 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 CRTC2Q53ET0 693 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 GJA10Q969M2 543 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 CACNA1SQ13698 1873 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 BUB1O43683 1085 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 PPP1R12BO60237 982 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 RASSF9O75901 435 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 HEXIM1O94992 359 aaKnown RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 EZRP15311 586 aaKnown RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 GNAT2P19087 354 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 MDH1P40925 334 aaKnown RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 TXNRD3Q86VQ6 643 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 C2CD5Q86YS7 1000 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 SRBD1Q8N5C6 995 aaKnown RBP11.13□□□□□ -0.63
COMMD4-203ENST00000480484 GLIS3Q8NEA6 775 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 ALS2CR12Q96Q35 445 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 TUBGCP2Q9BSJ2 902 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 TMEM60Q9H2L4 133 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 EXOC1Q9NV70 894 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 ZNF652Q9Y2D9 606 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 HYOU1Q9Y4L1 999 aa11.13□□□□□ -0.63
COMMD4-203ENST00000480484 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 AKR1B10O60218 316 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 SKAP2O75563 359 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-203ENST00000480484 GCFC2P16383 781 aaKnown RBP11.12□□□□□ -0.63
COMMD4-203ENST00000480484 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms