RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ZSWIM8A7E2V4 1837 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-206ENST00000480362 POTEB3A0JP26 581 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 SYCE3A1L190 88 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 FOXN1O15353 648 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 SORBS3O60504 671 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 SLITRK3O94933 977 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 ARIH2O95376 493 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 CCNE2O96020 404 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 UBA1P22314 1058 aaKnown RBP19.71■□□□□ 0.75
UPF3A-206ENST00000480362 CYP4A11Q02928 519 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 NEDD9Q14511 834 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 CCL14Q16627 93 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 LY6KQ17RY6 165 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 POTEBQ6S5H4 581 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 CYFIP1Q7L576 1253 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 CKAP2LQ8IYA6 745 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 PAGE5Q96GU1 130 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 KATNBL1Q9H079 304 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 CUEDC2Q9H467 287 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 TUFT1Q9NNX1 390 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 SAGE1Q9NXZ1 904 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 SLC9A2Q9UBY0 812 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 GABRQQ9UN88 632 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 KIAA1024Q9UPX6 916 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 SAMM50Q9Y512 469 aa19.71■□□□□ 0.75
UPF3A-206ENST00000480362 RBM47A0AV96 593 aaKnown RBP19.7■□□□□ 0.74
UPF3A-206ENST00000480362 TXNP10599 105 aaKnown RBP19.7■□□□□ 0.74
UPF3A-206ENST00000480362 SFNP31947 248 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 AFMP43652 599 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 JAK3P52333 1124 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 MDM2Q00987 491 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-206ENST00000480362 CAP1Q01518 475 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 CTTNQ14247 550 aaKnown RBP19.7■□□□□ 0.74
UPF3A-206ENST00000480362 TTLL4Q14679 1199 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 OLFML2BQ68BL8 750 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 CCDC62Q6P9F0 684 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 RBM43Q6ZSC3 357 aaKnown RBP19.7■□□□□ 0.74
UPF3A-206ENST00000480362 SH3RF1Q7Z6J0 888 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 TPH2Q8IWU9 490 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 GRAMD1CQ8IYS0 662 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 CD99L2Q8TCZ2 262 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 SCFD2Q8WU76 684 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 STAMQ92783 540 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 CCDC34Q96HJ3 373 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 ABHD16BQ9H3Z7 469 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 STK17AQ9UEE5 414 aa19.7■□□□□ 0.74
UPF3A-206ENST00000480362 HOOK1Q9UJC3 728 aaKnown RBP19.7■□□□□ 0.74
UPF3A-206ENST00000480362 WDR64B1ANS9 1081 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 GGPS1O95749 300 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 FLT3LGP49771 235 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 SP4Q02446 784 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 MAP2K1Q02750 393 aaPredicted RBP19.69■□□□□ 0.74
UPF3A-206ENST00000480362 ACVR2BQ13705 512 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 KCNK18Q7Z418 384 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 SMAP1Q8IYB5 467 aaPredicted RBP19.69■□□□□ 0.74
UPF3A-206ENST00000480362 RDM1Q8NG50 284 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 NEK9Q8TD19 979 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 ERCC4Q92889 916 aaPredicted RBP19.69■□□□□ 0.74
UPF3A-206ENST00000480362 BLOC1S4Q9NUP1 217 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 TELO2Q9Y4R8 837 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 PCDHA10Q9Y5I2 948 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 DOCK5Q9H7D0 1870 aa19.69■□□□□ 0.74
UPF3A-206ENST00000480362 A0A087WWV3 80 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 POTEFA5A3E0 1075 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 E9PMD0 336 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 FARP2O94887 1054 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-206ENST00000480362 P4HBP07237 508 aaKnown RBP19.68■□□□□ 0.74
UPF3A-206ENST00000480362 XRCC5P13010 732 aaKnown RBP19.68■□□□□ 0.74
UPF3A-206ENST00000480362 CYP2C19P33261 490 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 ACTR2P61160 394 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 PRKCZQ05513 592 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 PNOCQ13519 176 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 POSTNQ15063 836 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 PRAMEF19Q5SWL8 479 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 CELF3Q5SZQ8 465 aaKnown RBP19.68■□□□□ 0.74
UPF3A-206ENST00000480362 TMEM63BQ5T3F8 832 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 POTEGQ6S5H5 508 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 BANK1Q8NDB2 785 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 RAD54LQ92698 747 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 MTRQ99707 1265 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 MLXIPQ9HAP2 919 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 MAGEF1Q9HAY2 307 aa19.68■□□□□ 0.74
UPF3A-206ENST00000480362 ZHX1Q9UKY1 873 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-206ENST00000480362 FKTNO75072 461 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 IGHA2P01877 340 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 PSAPP07602 524 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 PRR29P0C7W0 189 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 MUTP22033 750 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 HOXD10P28358 340 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 ADCYAP1R1P41586 468 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 PSMC6P62333 389 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 MCM6Q14566 821 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 IQSEC1Q6DN90 963 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 ABHD15Q6UXT9 468 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 SV2BQ7L1I2 683 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 DHX37Q8IY37 1157 aaKnown RBP19.67■□□□□ 0.74
UPF3A-206ENST00000480362 KCTD17Q8N5Z5 321 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 LARP4BQ92615 738 aaKnown RBP19.67■□□□□ 0.74
UPF3A-206ENST00000480362 COPS5Q92905 334 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms