RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 GOLGA8IPA6NC78 632 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 GOLGA8JA6NMD2 632 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 KIF11P52732 1056 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 TFAMQ00059 246 aaKnown RBP15.48■□□□□ 0.07
NPHP4-208ENST00000478423 LLGL1Q15334 1064 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 DENND2CQ68D51 928 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 POTEGQ6S5H5 508 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 POTEEQ6S8J3 1075 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-208ENST00000478423 PDLIM2Q96JY6 352 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 APOL6Q9BWW8 343 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 UBE2TQ9NPD8 197 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-208ENST00000478423 RAB20Q9NX57 234 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 K7ERI5 159 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 KRT15P19012 456 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 MKRN3Q13064 507 aaKnown RBP15.47■□□□□ 0.07
NPHP4-208ENST00000478423 PPP2R5DQ14738 602 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 HADHQ16836 314 aaKnown RBP15.47■□□□□ 0.07
NPHP4-208ENST00000478423 SESTD1Q86VW0 696 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 MXD3Q9BW11 206 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 FEM1BQ9UK73 627 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 LGALS16A8MUM7 142 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 RNF8O76064 485 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 CTDNEP1O95476 244 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 KLRK1P26718 216 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 RNF146Q9NTX7 359 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 STIM2Q9P246 746 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 PHLPP2Q6ZVD8 1323 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 ZNF543Q08ER8 600 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 SETDB1Q15047 1291 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 CEP85LQ5SZL2 805 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 SNRNP48Q6IEG0 339 aaKnown RBP15.47■□□□□ 0.07
NPHP4-208ENST00000478423 METTL16Q86W50 562 aaKnown RBP15.47■□□□□ 0.07
NPHP4-208ENST00000478423 RAD54LQ92698 747 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 TRIM7Q9C029 511 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 PARP2Q9UGN5 583 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 TTLL3Q9Y4R7 772 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 RASA1P20936 1047 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 ORC2Q13416 577 aaPredicted RBP15.47■□□□□ 0.07
NPHP4-208ENST00000478423 CCDC144BQ3MJ40 725 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 CASC4Q6P4E1 433 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 SLC10A4Q96EP9 437 aa15.47■□□□□ 0.07
NPHP4-208ENST00000478423 NEURL4Q96JN8 1562 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 TBC1D8O95759 1140 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 FTCDO95954 541 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 ADCY8P40145 1251 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 GABPB1Q06547 395 aaPredicted RBP15.46■□□□□ 0.07
NPHP4-208ENST00000478423 USP49Q70CQ1 688 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 SMC6Q96SB8 1091 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 KRT12Q99456 494 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 BPIFA3Q9BQP9 254 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 PHF20Q9BVI0 1012 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
NPHP4-208ENST00000478423 A6NNZ2 444 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 PPM1FP49593 454 aaPredicted RBP15.46■□□□□ 0.07
NPHP4-208ENST00000478423 TUBB8Q3ZCM7 444 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 ALKBH5Q6P6C2 394 aaKnown RBP15.46■□□□□ 0.07
NPHP4-208ENST00000478423 CCDC117Q8IWD4 279 aaPredicted RBP15.46■□□□□ 0.07
NPHP4-208ENST00000478423 HOXC10Q9NYD6 342 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
NPHP4-208ENST00000478423 MST1RQ04912 1400 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 ITSN1Q15811 1721 aa15.46■□□□□ 0.07
NPHP4-208ENST00000478423 ZMYND10O75800 440 aa15.46■□□□□ 0.06
NPHP4-208ENST00000478423 BANK1Q8NDB2 785 aa15.46■□□□□ 0.06
NPHP4-208ENST00000478423 NACA2Q9H009 215 aa15.46■□□□□ 0.06
NPHP4-208ENST00000478423 SERPINA10Q9UK55 444 aa15.46■□□□□ 0.06
NPHP4-208ENST00000478423 DEPDC5O75140 1603 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 TEX33O43247 280 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 STAM2O75886 525 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 SRGAP2CP0DJJ0 459 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 STAT3P40763 770 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 PRELPP51888 382 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 OSTNP61366 133 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 BSPRYQ5W0U4 402 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 CDC42EP5Q6NZY7 148 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 TAOK1Q7L7X3 1001 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 MAGOHBQ96A72 148 aaKnown RBP15.45■□□□□ 0.06
NPHP4-208ENST00000478423 VPS37BQ9H9H4 285 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 NXF1Q9UBU9 619 aaKnown RBP15.45■□□□□ 0.06
NPHP4-208ENST00000478423 SALL3Q9BXA9 1300 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 PXDNQ92626 1479 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 WDR64B1ANS9 1081 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 IPO5O00410 1097 aaKnown RBP15.45■□□□□ 0.06
NPHP4-208ENST00000478423 HGSO14964 777 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-208ENST00000478423 SERPING1P05155 500 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 MARK3P27448 753 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 ALDH3A1P30838 453 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 PADI6Q6TGC4 694 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 RSAD2Q8WXG1 361 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 JRKLQ9Y4A0 524 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 ABCB11O95342 1321 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 REREQ9P2R6 1566 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 CAPN9O14815 690 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 MOCS3O95396 460 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 COASYQ13057 564 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 UHMK1Q8TAS1 419 aaKnown RBP15.45■□□□□ 0.06
NPHP4-208ENST00000478423 ZNF148Q9UQR1 794 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms