RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 GPATCH4Q5T3I0 446 aaKnown RBP11.4□□□□□ -0.58
COL4A5-204ENST00000477429 RNF135Q8IUD6 432 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 ENAHQ8N8S7 591 aaPredicted RBP11.4□□□□□ -0.58
COL4A5-204ENST00000477429 ATP6V0A1Q93050 837 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 RMDN1Q96DB5 314 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 MPHOSPH6Q99547 160 aaKnown RBP11.4□□□□□ -0.58
COL4A5-204ENST00000477429 NSUN3Q9H649 340 aaKnown RBP11.4□□□□□ -0.58
COL4A5-204ENST00000477429 RC3H2Q9HBD1 1191 aaKnown RBP11.4□□□□□ -0.58
COL4A5-204ENST00000477429 SETD4Q9NVD3 440 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
COL4A5-204ENST00000477429 PCDHGC5Q9Y5F6 944 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.59
COL4A5-204ENST00000477429 CEP250Q9BV73 2442 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 ZMYM6O95789 1325 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 C17orf102A2RUQ5 167 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 CHRNA1P02708 482 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 LGALS2P05162 132 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 PDE1AP54750 535 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 ADAM17P78536 824 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 GHRHRQ02643 423 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 SMAD2Q15796 467 aaKnown RBP11.39□□□□□ -0.59
COL4A5-204ENST00000477429 PTPROQ16827 1216 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
COL4A5-204ENST00000477429 RUFY4Q6ZNE9 571 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 MFSD6Q6ZSS7 791 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 STOX1Q6ZVD7 989 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 ADGRD2Q7Z7M1 963 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 VSIG10LQ86VR7 867 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 DGKHQ86XP1 1220 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 EVI5LQ96CN4 794 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 ZBTB10Q96DT7 871 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 KATNAL1Q9BW62 490 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 IFIH1Q9BYX4 1025 aaKnown RBP11.39□□□□□ -0.59
COL4A5-204ENST00000477429 IGFLR1Q9H665 355 aa11.39□□□□□ -0.59
COL4A5-204ENST00000477429 CCDC171Q6TFL3 1326 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 EMSYQ7Z589 1322 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 B4DLN1 442 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 B4E1Z4 1266 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 PROB1E7EW31 1015 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 H3BRB1 525 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 CTNNB1P35222 781 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 MRPL12P52815 198 aaKnown RBP11.38□□□□□ -0.59
COL4A5-204ENST00000477429 MRPS9P82933 396 aaKnown RBP11.38□□□□□ -0.59
COL4A5-204ENST00000477429 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
COL4A5-204ENST00000477429 HERC4Q5GLZ8 1057 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-204ENST00000477429 ANKRD45Q5TZF3 282 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 DGLUCYQ7Z3D6 616 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 LINC01599Q8WXQ3 324 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 SEPT8Q92599 483 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 ATOH1Q92858 354 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-204ENST00000477429 MTMR8Q96EF0 704 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 IL25Q9H293 177 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 TUT1Q9H6E5 874 aaKnown RBP11.38□□□□□ -0.59
COL4A5-204ENST00000477429 SENP2Q9HC62 589 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 CLEC1BQ9P126 229 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 PRKAG3Q9UGI9 489 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 PNMA2Q9UL42 364 aa11.38□□□□□ -0.59
COL4A5-204ENST00000477429 MRPL11Q9Y3B7 192 aaKnown RBP11.38□□□□□ -0.59
COL4A5-204ENST00000477429 EP300Q09472 2414 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-204ENST00000477429 C5orf67F2Z3F1 127 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 GHRP10912 638 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 BMPR1AP36894 532 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 FAM26DQ5JW98 314 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 RTN4RL1Q86UN2 441 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-204ENST00000477429 MCF2L2Q86YR7 1114 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 LMBR1Q8WVP7 490 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 ZNF689Q96CS4 500 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-204ENST00000477429 IL17RAQ96F46 866 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 MSLNLQ96KJ4 702 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 SAMD11Q96NU1 681 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 ZSCAN10Q96SZ4 725 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-204ENST00000477429 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 DOCK5Q9H7D0 1870 aa11.37□□□□□ -0.59
COL4A5-204ENST00000477429 ENPP3O14638 875 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 CYTH3O43739 400 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 DHX16O60231 1041 aaKnown RBP11.36□□□□□ -0.59
COL4A5-204ENST00000477429 GATMP50440 423 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 MGAT3Q09327 533 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 ADAM15Q13444 863 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 LPIN1Q14693 890 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 ASPRV1Q53RT3 343 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 CYB5R4Q7L1T6 521 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 CYFIP1Q7L576 1253 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 CRIPAKQ8N1N5 446 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 ESR2Q92731 530 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 EDAQ92838 391 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 GPR20Q99678 358 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 KAT14Q9H8E8 782 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 EHMT1Q9H9B1 1298 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 MAD2L2Q9UI95 211 aa11.36□□□□□ -0.59
COL4A5-204ENST00000477429 TMEM221A6NGB7 291 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 M0R296 226 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 STXBP3O00186 592 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 GLP2RO95838 553 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 ITGB1P05556 798 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 PARP1P09874 1014 aaKnown RBP11.35□□□□□ -0.59
COL4A5-204ENST00000477429 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
COL4A5-204ENST00000477429 SEC23AQ15436 765 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms