RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MASTLQ96GX5 879 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 CALR3Q96L12 384 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 ZSCAN10Q96SZ4 725 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 TMX4Q9H1E5 349 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 NOD2Q9HC29 1040 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 LRP2BPQ9P2M1 347 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 TMEM59LQ9UK28 342 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 PCDHGC5Q9Y5F6 944 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 ESYT3A0FGR9 886 aa16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 PLEKHA8P1O95397 391 aa16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 SCG2P13521 617 aa16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 KLRK1P26718 216 aa16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 CTNNA1P35221 906 aaKnown RBP16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 ZNF844Q08AG5 666 aa16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 MEI1Q5TIA1 1274 aa16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 DTHD1Q6ZMT9 781 aa16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 USP38Q8NB14 1042 aa16.73■□□□□ 0.27
CLSTN1-205ENST00000477264 RAD51CO43502 376 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 BUB1BO60566 1050 aaPredicted RBP16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 SSBP05455 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 PRPHP41219 470 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 UBA7P41226 1012 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 GPSM2P81274 684 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 HLTFQ14527 1009 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 ITIH4Q14624 930 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 QPCTQ16769 361 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 ANKRD40Q6AI12 368 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 CNNM4Q6P4Q7 775 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 ENAHQ8N8S7 591 aaPredicted RBP16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 CCDC197Q8NCU1 140 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 RAPGEF5Q92565 580 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 MS4A14Q96JA4 679 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 NDST4Q9H3R1 872 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 GGA1Q9UJY5 639 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 ZSCAN5CA6NGD5 496 aaPredicted RBP16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 LRRC53A6NM62 1247 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 H0YIN7 160 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 PPIP5K2O43314 1243 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 UFL1O94874 794 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 DRD4P21917 467 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 E2F5Q15329 346 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 NAB2Q15742 525 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 FOXR2Q6PJQ5 311 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 CPLX4Q7Z7G2 160 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 LCORLQ8N3X6 602 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 ARMC2Q8NEN0 867 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 SLC16A10Q8TF71 515 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 BAP1Q92560 729 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 TAF4BQ92750 862 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 AK8Q96MA6 479 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 SH3GLB2Q9NR46 395 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 ABCF2Q9UG63 623 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 SALL4Q9UJQ4 1053 aa16.72■□□□□ 0.27
CLSTN1-205ENST00000477264 LIN7AO14910 233 aaPredicted RBP16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 EIF3BP55884 814 aaKnown RBP16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 PDE4DQ08499 809 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 SPRED3Q2MJR0 410 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 CACNA2D4Q7Z3S7 1137 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 ZNF804AQ7Z570 1209 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 CHMP6Q96FZ7 201 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 PBKQ96KB5 322 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 C7orf25Q9BPX7 421 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 MOV10L1Q9BXT6 1211 aaKnown RBP16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 HOMER3Q9NSC5 361 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 COL11A2P13942 1736 aaPredicted RBP16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 CCT8L1PA6NM43 557 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 BTNL10A8MVZ5 291 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 SLC1A4P43007 532 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 AMPD3Q01432 767 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 RASSF7Q02833 373 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 TROAPQ12815 778 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 PFKFB3Q16875 520 aaPredicted RBP16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 SLC9C1Q4G0N8 1177 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 ODF2Q5BJF6 829 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 RRAGAQ7L523 313 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 EGFL6Q8IUX8 553 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 POLD4Q9HCU8 107 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 SLC12A4Q9UP95 1085 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
CLSTN1-205ENST00000477264 PALMO75781 387 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 SERPING1P05155 500 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 SARNPP82979 210 aaKnown RBP16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 UAP1Q16222 522 aaPredicted RBP16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 TXNRD3Q86VQ6 643 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 CCDC63Q8NA47 563 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 PSMD1Q99460 953 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 FAM129AQ9BZQ8 928 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 C15orf41Q9Y2V0 281 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 LRRC37AA6NMS7 1700 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 ATP8B3O60423 1300 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 CCDC188H7C350 402 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 ASAP2O43150 1006 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 BUB1O43683 1085 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 PRKAB2O43741 272 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 ECHS1P30084 290 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 ERVK-9P63128 1117 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms