RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 H0Y858 1186 aa4.7□□□□□ -1.66
XRN1-211ENST00000477237 MYO1BO43795 1136 aa4.7□□□□□ -1.66
XRN1-211ENST00000477237 DNAJA1P31689 397 aaKnown RBP4.7□□□□□ -1.66
XRN1-211ENST00000477237 HIBADHP31937 336 aaKnown RBP4.7□□□□□ -1.66
XRN1-211ENST00000477237 ADRA1BP35368 520 aa4.7□□□□□ -1.66
XRN1-211ENST00000477237 ZC3H6P61129 1189 aaKnown RBP4.7□□□□□ -1.66
XRN1-211ENST00000477237 GRIN1Q05586 938 aa4.7□□□□□ -1.66
XRN1-211ENST00000477237 FOXL1Q12952 345 aa4.7□□□□□ -1.66
XRN1-211ENST00000477237 PHOSPHO1Q8TCT1 267 aa4.7□□□□□ -1.66
XRN1-211ENST00000477237 CARD11Q9BXL7 1154 aa4.7□□□□□ -1.66
XRN1-211ENST00000477237 TLR9Q9NR96 1032 aa4.7□□□□□ -1.66
XRN1-211ENST00000477237 DGKIO75912 1065 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 IL18BPO95998 194 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 LCP1P13796 627 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 MRPS21P82921 87 aaKnown RBP4.69□□□□□ -1.66
XRN1-211ENST00000477237 LSAMPQ13449 338 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 KIAA1211LQ6NV74 962 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 CRACR2BQ8N4Y2 399 aaPredicted RBP4.69□□□□□ -1.66
XRN1-211ENST00000477237 C19orf47Q8N9M1 422 aaKnown RBP4.69□□□□□ -1.66
XRN1-211ENST00000477237 TTLL11Q8NHH1 800 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 CLEC4DQ8WXI8 215 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 CHAMP1Q96JM3 812 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 MRGPRX3Q96LB0 322 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 CLDND1Q9NY35 253 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 ARHGAP20Q9P2F6 1191 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 PCDHA2Q9Y5H9 948 aa4.69□□□□□ -1.66
XRN1-211ENST00000477237 MEFVO15553 781 aaPredicted RBP4.68□□□□□ -1.66
XRN1-211ENST00000477237 GJA4P35212 333 aa4.68□□□□□ -1.66
XRN1-211ENST00000477237 FSTL1Q12841 308 aa4.68□□□□□ -1.66
XRN1-211ENST00000477237 KCNAB2Q13303 367 aa4.68□□□□□ -1.66
XRN1-211ENST00000477237 MRPL58Q14197 206 aaKnown RBP4.68□□□□□ -1.66
XRN1-211ENST00000477237 RPUSD2Q8IZ73 545 aaKnown RBP4.68□□□□□ -1.66
XRN1-211ENST00000477237 KREMEN2Q8NCW0 462 aa4.68□□□□□ -1.66
XRN1-211ENST00000477237 CRBNQ96SW2 442 aa4.68□□□□□ -1.66
XRN1-211ENST00000477237 C12orf65Q9H3J6 166 aaKnown RBP4.68□□□□□ -1.66
XRN1-211ENST00000477237 EPB41L1Q9H4G0 881 aa4.68□□□□□ -1.66
XRN1-211ENST00000477237 AURKAIP1Q9NWT8 199 aaPredicted RBP4.68□□□□□ -1.66
XRN1-211ENST00000477237 NOP56O00567 594 aaKnown RBP4.67□□□□□ -1.66
XRN1-211ENST00000477237 SLC27A2O14975 620 aa4.67□□□□□ -1.66
XRN1-211ENST00000477237 MSX2P35548 267 aaPredicted RBP4.67□□□□□ -1.66
XRN1-211ENST00000477237 RRADP55042 308 aa4.67□□□□□ -1.66
XRN1-211ENST00000477237 PFKPQ01813 784 aa4.67□□□□□ -1.66
XRN1-211ENST00000477237 LAIR1Q6GTX8 287 aa4.67□□□□□ -1.66
XRN1-211ENST00000477237 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
XRN1-211ENST00000477237 RBM12BQ8IXT5 1001 aaKnown RBP4.67□□□□□ -1.66
XRN1-211ENST00000477237 NTN5Q8WTR8 489 aaPredicted RBP4.67□□□□□ -1.66
XRN1-211ENST00000477237 APBA2Q99767 749 aa4.67□□□□□ -1.66
XRN1-211ENST00000477237 HECAQ9UBI9 543 aaPredicted RBP4.67□□□□□ -1.66
XRN1-211ENST00000477237 NR2E1Q9Y466 385 aa4.67□□□□□ -1.66
XRN1-211ENST00000477237 POLD1P28340 1107 aa4.66□□□□□ -1.66
XRN1-211ENST00000477237 ECI1P42126 302 aa4.66□□□□□ -1.66
XRN1-211ENST00000477237 TBR1Q16650 682 aa4.66□□□□□ -1.66
XRN1-211ENST00000477237 BHLHA9Q7RTU4 235 aa4.66□□□□□ -1.66
XRN1-211ENST00000477237 TMPRSS6Q8IU80 811 aa4.66□□□□□ -1.66
XRN1-211ENST00000477237 TRIM48Q8IWZ4 208 aa4.66□□□□□ -1.66
XRN1-211ENST00000477237 GPR150Q8NGU9 434 aa4.66□□□□□ -1.66
XRN1-211ENST00000477237 BTN2A2Q8WVV5 523 aa4.66□□□□□ -1.66
XRN1-211ENST00000477237 TACO1Q9BSH4 297 aaKnown RBP4.66□□□□□ -1.66
XRN1-211ENST00000477237 TBX1O43435 398 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 MAFKO60675 156 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 FAHP16930 419 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 PROZP22891 400 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 RPS19P39019 145 aaKnown RBP4.65□□□□□ -1.67
XRN1-211ENST00000477237 GIPRP48546 466 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 EIF6P56537 245 aaKnown RBP4.65□□□□□ -1.67
XRN1-211ENST00000477237 TOP3AQ13472 1001 aaPredicted RBP4.65□□□□□ -1.67
XRN1-211ENST00000477237 TESK1Q15569 626 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 PRSS53Q2L4Q9 553 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 PAN2Q504Q3 1202 aaKnown RBP4.65□□□□□ -1.67
XRN1-211ENST00000477237 ZKSCAN2Q63HK3 967 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 CYP4F22Q6NT55 531 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 VHLLQ6RSH7 139 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 CFHR4Q92496 578 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 PPP1R14AQ96A00 147 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 ZNF764Q96H86 408 aaPredicted RBP4.65□□□□□ -1.67
XRN1-211ENST00000477237 CDIP1Q9H305 208 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 SLC6A20Q9NP91 592 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 GINM1Q9NU53 330 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 PLA2G3Q9NZ20 509 aa4.65□□□□□ -1.67
XRN1-211ENST00000477237 ESYT3A0FGR9 886 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 TMEM191CA6NGB0 347 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 ZNF839A8K0R7 811 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 NUDT3O95989 172 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 LTFP02788 710 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 ENO2P09104 434 aaPredicted RBP4.64□□□□□ -1.67
XRN1-211ENST00000477237 LTBRP36941 435 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 PPP2R5EQ16537 467 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 ZNF394Q53GI3 561 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 ZMAT1Q5H9K5 638 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 ACBD5Q5T8D3 534 aaPredicted RBP4.64□□□□□ -1.67
XRN1-211ENST00000477237 CD276Q5ZPR3 534 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 SGMS1Q86VZ5 419 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 PIP4K2CQ8TBX8 421 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 PARPBPQ9NWS1 579 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 PTGFRNQ9P2B2 879 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 GIT1Q9Y2X7 761 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 PCDHGB7Q9Y5F8 929 aa4.64□□□□□ -1.67
XRN1-211ENST00000477237 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 MASP2O00187 686 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 KRIT1O00522 736 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms