RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 PIK3CDO00329 1044 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 POLR3GO15318 223 aaPredicted RBP17.67■□□□□ 0.42
VARS2-207ENST00000476162 CDK17Q00537 523 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.422e-8■■■■□ 24.4
VARS2-207ENST00000476162 ZSCAN26Q16670 478 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 KIAA1328Q86T90 577 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 CCDC155Q8N6L0 562 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 CEP112Q8N8E3 955 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 TBC1D5Q92609 795 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 TANGO6Q9C0B7 1094 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 PLAGL2Q9UPG8 496 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 DNM3Q9UQ16 869 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 SMCHD1A6NHR9 2005 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 PITPNM2Q9BZ72 1349 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 FRMD3A2A2Y4 597 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 EIF3CLB5ME19 914 aaKnown RBP17.67■□□□□ 0.42
VARS2-207ENST00000476162 CFBP00751 764 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 CYP3A4P08684 503 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 CCDC174Q6PII3 467 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 MIGA2Q7L4E1 593 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 EIF3CQ99613 913 aaKnown RBP17.67■□□□□ 0.42
VARS2-207ENST00000476162 TMEM39BQ9GZU3 492 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 EMILIN3Q9NT22 766 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 VAV3Q9UKW4 847 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 COL4A5P29400 1685 aa17.67■□□□□ 0.42
VARS2-207ENST00000476162 RCCD1A6NED2 376 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 IPO7O95373 1038 aaKnown RBP17.66■□□□□ 0.42
VARS2-207ENST00000476162 PLEKP08567 350 aaPredicted RBP17.66■□□□□ 0.42
VARS2-207ENST00000476162 DPEP1P16444 411 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 KCNA3P22001 575 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 HNRNPH3P31942 346 aaKnown RBP17.66■□□□□ 0.42
VARS2-207ENST00000476162 CYP27A1Q02318 531 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 CYP4A11Q02928 519 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 ZYXQ15942 572 aaKnown RBP17.66■□□□□ 0.42
VARS2-207ENST00000476162 CCDC40Q4G0X9 1142 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 TMCO3Q6UWJ1 677 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 SYT2Q8N9I0 419 aaPredicted RBP17.66■□□□□ 0.42
VARS2-207ENST00000476162 JAKMIP2Q96AA8 810 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 LACRTQ9GZZ8 138 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 KCTD10Q9H3F6 313 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 GIT2Q14161 759 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 ZNF662Q6ZS27 426 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 CCDC42Q96M95 316 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 PARD6BQ9BYG5 372 aa17.66■□□□□ 0.42
VARS2-207ENST00000476162 GUCY2CP25092 1073 aa17.65■□□□□ 0.42
VARS2-207ENST00000476162 AMPD2Q01433 879 aa17.65■□□□□ 0.42
VARS2-207ENST00000476162 KCNMA1Q12791 1236 aa17.65■□□□□ 0.42
VARS2-207ENST00000476162 SRLQ86TD4 932 aa17.65■□□□□ 0.42
VARS2-207ENST00000476162 SMCR8Q8TEV9 937 aaPredicted RBP17.65■□□□□ 0.42
VARS2-207ENST00000476162 CEP63Q96MT8 703 aa17.65■□□□□ 0.42
VARS2-207ENST00000476162 NCAPGQ9BPX3 1015 aa17.65■□□□□ 0.42
VARS2-207ENST00000476162 CWC15Q9P013 229 aaKnown RBP17.65■□□□□ 0.42
VARS2-207ENST00000476162 ARHGAP20Q9P2F6 1191 aa17.65■□□□□ 0.42
VARS2-207ENST00000476162 MYO6Q9UM54 1294 aa17.65■□□□□ 0.42
VARS2-207ENST00000476162 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 EML1O00423 815 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 ENC1O14682 589 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 ZNF263O14978 683 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 KRT86O43790 486 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 CASP5P51878 434 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 GPS2Q13227 327 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.42
VARS2-207ENST00000476162 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 RRAGAQ7L523 313 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 KRT26Q7Z3Y9 468 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 MYCBPQ99417 103 aaPredicted RBP17.64■□□□□ 0.42
VARS2-207ENST00000476162 REEP2Q9BRK0 252 aa17.64■□□□□ 0.42
VARS2-207ENST00000476162 PSME4Q14997 1843 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 LRRC53A6NM62 1247 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 SEC31AO94979 1220 aaKnown RBP17.64■□□□□ 0.41
VARS2-207ENST00000476162 TRAF1Q13077 416 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 GPIHBP1Q8IV16 184 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 CHURC1Q8WUH1 139 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 BAP1Q92560 729 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 EIF2AK1Q9BQI3 630 aaKnown RBP17.64■□□□□ 0.41
VARS2-207ENST00000476162 RANBP17Q9H2T7 1088 aaKnown RBP17.64■□□□□ 0.41
VARS2-207ENST00000476162 VCPKMTQ9H867 229 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 RGL1Q9NZL6 768 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 STK24Q9Y6E0 443 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 DUSP10Q9Y6W6 482 aa17.64■□□□□ 0.41
VARS2-207ENST00000476162 GCOM1H8Y6P7 765 aaPredicted RBP17.63■□□□□ 0.41
VARS2-207ENST00000476162 ATP8B1O43520 1251 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 POLR2MP0CAP2 368 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 WHAMMP3Q1A5X7 153 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 WDR18Q9BV38 432 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 GLIS2Q9BZE0 524 aaPredicted RBP17.63■□□□□ 0.41
VARS2-207ENST00000476162 BHMT2Q9H2M3 363 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 RGS17Q9UGC6 210 aaPredicted RBP17.63■□□□□ 0.41
VARS2-207ENST00000476162 ZNRF3Q9ULT6 936 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 CLGNO14967 610 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 TBC1D12O60347 775 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 GNA14O95837 355 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 CAP2P40123 477 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 UBXN2AP68543 259 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 ADAM9Q13443 819 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 SPA17Q15506 151 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 POTEAQ6S8J7 498 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 SFR1Q86XK3 245 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 HDAC6Q9UBN7 1215 aa17.63■□□□□ 0.41
VARS2-207ENST00000476162 BRD2P25440 801 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms