RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 EVX2Q03828 476 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 ACTRT1Q8TDG2 376 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 SYN2Q92777 582 aaPredicted RBP20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 CENPTQ96BT3 561 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 ADAMTS1Q9UHI8 967 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 PNMA2Q9UL42 364 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 AMPD3Q01432 767 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 DHX9Q08211 1270 aaKnown RBP20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 AGAP11Q8TF27 550 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 CALR3Q96L12 384 aaKnown RBP20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 AK8Q96MA6 479 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 RIOK1Q9BRS2 568 aaKnown RBP20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 NUCKS1Q9H1E3 243 aaKnown RBP20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 AMACRQ9UHK6 382 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 RREB1Q92766 1687 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 FGFR1OPO95684 399 aaKnown RBP20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 USP11P51784 963 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 ARID5AQ03989 594 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 PTPROQ16827 1216 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 CDCA2Q69YH5 1023 aaPredicted RBP20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 ARHGAP27Q6ZUM4 889 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 L3MBTL3Q96JM7 780 aaPredicted RBP20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 SPAG5Q96R06 1193 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 COL5A2P05997 1499 aaPredicted RBP20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 POLR2FP61218 127 aaKnown RBP20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 BIRC2Q13490 618 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 ITIH4Q14624 930 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 FAM47AQ5JRC9 791 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 PIGWQ7Z7B1 504 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 CCHCR1Q8TD31 782 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 PBKQ96KB5 322 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 ZNF570Q96NI8 536 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 KIF9Q9HAQ2 790 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 SH3GLB2Q9NR46 395 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 PANK4Q9NVE7 773 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 ABCF2Q9UG63 623 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 ZBTB1Q9Y2K1 713 aa20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 NOC2LQ9Y3T9 749 aaKnown RBP20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.36■□□□□ 0.85
ECHDC1-214ENST00000474289 EME2A4GXA9 379 aaPredicted RBP20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 PGRMC1O00264 195 aaKnown RBP20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 CAND2O75155 1236 aa20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 MMEP08473 750 aa20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 CHN1P15882 459 aa20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 SARNPP82979 210 aaKnown RBP20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 ENOX2Q16206 610 aaKnown RBP20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 DHX37Q8IY37 1157 aaKnown RBP20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 KCNMB3Q9NPA1 279 aa20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 ASAP2O43150 1006 aa20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 CDC25CP30307 473 aa20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 DYNLL1P63167 89 aaKnown RBP20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 LRRC63Q05C16 580 aa20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 FAM133BQ5BKY9 247 aaKnown RBP20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 SLC4A9Q96Q91 983 aa20.35■□□□□ 0.85
ECHDC1-214ENST00000474289 CFAP73A6NFT4 308 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 PCP11498 1178 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 ITGA4P13612 1032 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 PEX19P40855 299 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 ZNF268Q14587 947 aaPredicted RBP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 GUF1Q8N442 669 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 ATXN2LQ8WWM7 1075 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.34■□□□□ 0.857e-6■■■■□ 21.2
ECHDC1-214ENST00000474289 LSM14BQ9BX40 385 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 NOP53Q9NZM5 478 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 AGAP1Q9UPQ3 857 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 TTI1O43156 1089 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 OR52Z1P0C646 297 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 ZBTB48P10074 688 aaPredicted RBP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 RAPGEF1Q13905 1077 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 TRPM8Q7Z2W7 1104 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 RNF217Q8TC41 542 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 MMTAG2Q9BU76 263 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 BRIP1Q9BX63 1249 aa20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.34■□□□□ 0.85
ECHDC1-214ENST00000474289 AFF2P51816 1311 aa20.33■□□□□ 0.85
ECHDC1-214ENST00000474289 KRIT1O00522 736 aa20.33■□□□□ 0.85
ECHDC1-214ENST00000474289 METTL13Q8N6R0 699 aa20.33■□□□□ 0.85
ECHDC1-214ENST00000474289 FAM133AQ8N9E0 248 aa20.33■□□□□ 0.85
ECHDC1-214ENST00000474289 SEC14L1Q92503 715 aa20.33■□□□□ 0.85
ECHDC1-214ENST00000474289 ACSBG1Q96GR2 724 aa20.33■□□□□ 0.85
ECHDC1-214ENST00000474289 SPATS2LQ9NUQ6 558 aaKnown RBP20.33■□□□□ 0.85
ECHDC1-214ENST00000474289 SLIT2O94813 1529 aa20.33■□□□□ 0.85
ECHDC1-214ENST00000474289 CICQ96RK0 1608 aaPredicted RBP20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 MYMKA6NI61 221 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 USP17L12C9JPN9 530 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 USP17L21D6R901 530 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 ALADP13716 330 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 KIF5BP33176 963 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 ICA1Q05084 483 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 KLHL30Q0D2K2 578 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 UNC13DQ70J99 1090 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 DYMQ7RTS9 669 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 LRRC34Q8IZ02 419 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 LRRC57Q8N9N7 239 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 CELF4Q9BZC1 486 aaKnown RBP20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 DPH5Q9H2P9 285 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 ATP8A1Q9Y2Q0 1164 aa20.33■□□□□ 0.84
ECHDC1-214ENST00000474289 ANKRD36CQ5JPF3 1778 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms