RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PAHP00439 452 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 RPS6KB1P23443 525 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 WEE1P30291 646 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 MTHFRP42898 656 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 MAPK9P45984 424 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 NASPP49321 788 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 TCEA2Q15560 299 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 BOLA3Q53S33 107 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 VPS53Q5VIR6 699 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 HHATQ5VTY9 493 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 FAM117BQ6P1L5 589 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 BRICD5Q6PL45 260 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 SEPT14Q6ZU15 432 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 TBC1D1Q86TI0 1168 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 EPS8L1Q8TE68 723 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 GTF3C2Q8WUA4 911 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 AASDHPPTQ9NRN7 309 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 POGKQ9P215 609 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 PDP2Q9P2J9 529 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 PLAAQ9Y263 795 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 LEMD3Q9Y2U8 911 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 COL5A2P05997 1499 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 PARP1P09874 1014 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 PHKG2P15735 406 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 CYP11B2P19099 503 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 KCNQ4P56696 695 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 EVCP57679 992 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 SP140Q13342 867 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 SLC5A9Q2M3M2 681 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 SETMARQ53H47 684 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 MUM1L1Q5H9M0 696 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 DSTYKQ6XUX3 929 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 FASTKD5Q7L8L6 764 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 TMEM110Q86TL2 294 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 RABGGTAQ92696 567 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 HOOK2Q96ED9 719 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 EPSTI1Q96J88 318 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 TNIP3Q96KP6 325 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 CCDC114Q96M63 670 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 USB1Q9BQ65 265 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 ZNF180Q9UJW8 692 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 MTUS1Q9ULD2 1270 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 USP54Q70EL1 1684 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 ADAMTSL1Q8N6G6 1762 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 MX2P20592 715 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 ETFBP38117 255 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 CENPAP49450 140 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 USP11P51784 963 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 KIF23Q02241 960 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 SUZ12Q15022 739 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 CAVIN4Q5BKX8 364 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 TATDN1Q6P1N9 297 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 IGF2-ASQ6U949 168 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 GBP6Q6ZN66 633 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 IQCA1Q86XH1 822 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 ANKMY2Q8IV38 441 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 ABTB2Q8N961 1025 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 USP38Q8NB14 1042 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 STON2Q8WXE9 905 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 RBM14Q96PK6 669 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 C7orf25Q9BPX7 421 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 NIFKQ9BYG3 293 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 SEMA4AQ9H3S1 761 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 ELAC1Q9H777 363 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 CAAP1Q9H8G2 361 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 IL20Q9NYY1 176 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 MTRRQ9UBK8 725 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 MTF2Q9Y483 593 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 TACC3Q9Y6A5 838 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 SLIT3O75094 1523 aa6.77□□□□□ -1.33
SMARCE1-208ENST00000474246 SFI1A8K8P3 1242 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 APAF1O14727 1248 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 TLL1O43897 1013 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 KRT1P04264 644 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 P4HA1P13674 534 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 STMN1P16949 149 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 S100A5P33763 92 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SEPHS1P49903 392 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 LAPTM5Q13571 262 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 MTMR3Q13615 1198 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SEMA3AQ14563 771 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 COG2Q14746 738 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SLC9A5Q14940 896 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SLC14A2Q15849 920 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 DBN1Q16643 649 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 CLPPQ16740 277 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 KIAA0753Q2KHM9 967 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 VWA3BQ502W6 1294 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 KDELC1Q6UW63 502 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 HS2ST1Q7LGA3 356 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 CCDC186Q7Z3E2 898 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 LINC00469Q8N7U9 141 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 GBP7Q8N8V2 638 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 CCDC148Q8NFR7 591 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 CCDC26Q8TAB7 109 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 ACMSDQ8TDX5 336 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 HPS3Q969F9 1004 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 CRELD1Q96HD1 420 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 COG8Q96MW5 612 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms