RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 TTLL11Q8NHH1 800 aa8.47□□□□□ -1.05
SEC22A-204ENST00000473494 RNF32Q9H0A6 362 aa8.47□□□□□ -1.05
SEC22A-204ENST00000473494 PCIF1Q9H4Z3 704 aa8.47□□□□□ -1.05
SEC22A-204ENST00000473494 KCNH7Q9NS40 1196 aa8.47□□□□□ -1.05
SEC22A-204ENST00000473494 NUDT5Q9UKK9 219 aa8.47□□□□□ -1.05
SEC22A-204ENST00000473494 G3BP2Q9UN86 482 aaKnown RBP8.47□□□□□ -1.05
SEC22A-204ENST00000473494 YBX2Q9Y2T7 364 aaKnown RBP8.47□□□□□ -1.05
SEC22A-204ENST00000473494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.46□□□□□ -1.06
SEC22A-204ENST00000473494 GABRDO14764 452 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 SLC27A2O14975 620 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 NEK2P51955 445 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 KIF11P52732 1056 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 ITKQ08881 620 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 DDB1Q16531 1140 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 CPZQ66K79 652 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 CC2D1AQ6P1N0 951 aaPredicted RBP8.46□□□□□ -1.06
SEC22A-204ENST00000473494 PAQR3Q6TCH7 311 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 HDGFL2Q7Z4V5 671 aaPredicted RBP8.46□□□□□ -1.06
SEC22A-204ENST00000473494 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.46□□□□□ -1.06
SEC22A-204ENST00000473494 PASD1Q8IV76 773 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 PEX11GQ96HA9 241 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 ACSS2Q9NR19 701 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 PALD1Q9ULE6 856 aa8.46□□□□□ -1.06
SEC22A-204ENST00000473494 TCRBV5S2A0A599 114 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 SCDO00767 359 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 PTPN1P18031 435 aaKnown RBP8.45□□□□□ -1.06
SEC22A-204ENST00000473494 SDHAP31040 664 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 GALK1P51570 392 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
SEC22A-204ENST00000473494 MCL1Q07820 350 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 TUSC3Q13454 348 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 SEC23AQ15436 765 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 TERF2Q15554 542 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 SMAD2Q15796 467 aaKnown RBP8.45□□□□□ -1.06
SEC22A-204ENST00000473494 ABHD4Q8TB40 342 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 ELF4Q99607 663 aaPredicted RBP8.45□□□□□ -1.06
SEC22A-204ENST00000473494 SIT1Q9Y3P8 196 aa8.45□□□□□ -1.06
SEC22A-204ENST00000473494 C4BPAP04003 597 aaKnown RBP8.44□□□□□ -1.06
SEC22A-204ENST00000473494 SLC9A1P19634 815 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 FNTBP49356 437 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 NR1I3Q14994 352 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 ZMYM1Q5SVZ6 1142 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 BROXQ5VW32 411 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 ESRP1Q6NXG1 681 aaKnown RBP8.44□□□□□ -1.06
SEC22A-204ENST00000473494 EP400NLQ6ZTU2 488 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 ABI1Q8IZP0 508 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 CBARPQ8N350 705 aaPredicted RBP8.44□□□□□ -1.06
SEC22A-204ENST00000473494 ZNF610Q8N9Z0 462 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 TSPAN17Q96FV3 270 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 SMAD5Q99717 465 aaKnown RBP8.44□□□□□ -1.06
SEC22A-204ENST00000473494 CCDC8Q9H0W5 538 aaPredicted RBP8.44□□□□□ -1.06
SEC22A-204ENST00000473494 ZMAT4Q9H898 229 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 VTA1Q9NP79 307 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 EID1Q9Y6B2 187 aa8.44□□□□□ -1.06
SEC22A-204ENST00000473494 FAM90A27PA6NNH2 459 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 BUB1BO60566 1050 aaPredicted RBP8.43□□□□□ -1.06
SEC22A-204ENST00000473494 LTFP02788 710 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 CYP17A1P05093 508 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 AFMP43652 599 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 LRRC32Q14392 662 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 INAVAQ3KP66 663 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 RGL3Q3MIN7 710 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 TRIM48Q8IWZ4 208 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 CHMP4CQ96CF2 233 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 INTS4Q96HW7 963 aaKnown RBP8.43□□□□□ -1.06
SEC22A-204ENST00000473494 SPEF1Q9Y4P9 236 aa8.43□□□□□ -1.06
SEC22A-204ENST00000473494 HYAL3O43820 417 aaPredicted RBP8.42□□□□□ -1.06
SEC22A-204ENST00000473494 FBXO21O94952 628 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 ZBTB7AO95365 584 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 LSP1P33241 339 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 SLC9A5Q14940 896 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 PLEKHN1Q494U1 663 aaPredicted RBP8.42□□□□□ -1.06
SEC22A-204ENST00000473494 CATSPEREQ5SY80 951 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 RPTNQ6XPR3 784 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 CBLL1Q75N03 491 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 SIRT2Q8IXJ6 389 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 RAVER1Q8IY67 606 aaKnown RBP8.42□□□□□ -1.06
SEC22A-204ENST00000473494 ZZZ3Q8IYH5 903 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 TOMM22Q9NS69 142 aa8.42□□□□□ -1.06
SEC22A-204ENST00000473494 ZC3H12DA2A288 527 aaKnown RBP8.41□□□□□ -1.06
SEC22A-204ENST00000473494 MPOP05164 745 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 PTX3P26022 381 aaPredicted RBP8.41□□□□□ -1.06
SEC22A-204ENST00000473494 EPHA7Q15375 998 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 NFE2Q16621 373 aaPredicted RBP8.41□□□□□ -1.06
SEC22A-204ENST00000473494 MILR1Q7Z6M3 343 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 RASSF3Q86WH2 238 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 MIB1Q86YT6 1006 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 RBM12BQ8IXT5 1001 aaKnown RBP8.41□□□□□ -1.06
SEC22A-204ENST00000473494 ARRDC4Q8NCT1 418 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 CLEC4DQ8WXI8 215 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 AHCYL2Q96HN2 611 aaKnown RBP8.41□□□□□ -1.06
SEC22A-204ENST00000473494 KIRREL1Q96J84 757 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 C16orf92Q96LL3 132 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 SLC6A17Q9H1V8 727 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 RXFP1Q9HBX9 757 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 RIC8BQ9NVN3 520 aa8.41□□□□□ -1.06
SEC22A-204ENST00000473494 RASSF10A6NK89 507 aa8.4□□□□□ -1.06
SEC22A-204ENST00000473494 ACOT7O00154 380 aa8.4□□□□□ -1.06
SEC22A-204ENST00000473494 MAPKAPK2P49137 400 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms