RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PPP4R3AQ6IN85 833 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 CCDC114Q96M63 670 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 ASCC2Q9H1I8 757 aaPredicted RBP11.15□□□□□ -0.62
APTX-216ENST00000472896 EHD4Q9H223 541 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 HOMER3Q9NSC5 361 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 SPATS2LQ9NUQ6 558 aaKnown RBP11.15□□□□□ -0.62
APTX-216ENST00000472896 DDX20Q9UHI6 824 aaKnown RBP11.15□□□□□ -0.62
APTX-216ENST00000472896 GAKO14976 1311 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 GOLGA8BA8MQT2 603 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 KRT86O43790 486 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 PPP1R37O75864 691 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 NDUFA10O95299 355 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 FAM107AO95990 144 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 PRLRP16471 622 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 PHKA1P46020 1223 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 GCLCP48506 637 aaPredicted RBP11.14□□□□□ -0.63
APTX-216ENST00000472896 ADCY2Q08462 1091 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 BIRC2Q13490 618 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 HSP90AA4PQ58FG1 418 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 TTMPQ5BVD1 217 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 LHX8Q68G74 356 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 TRMT44Q8IYL2 757 aaKnown RBP11.14□□□□□ -0.63
APTX-216ENST00000472896 ARFGAP2Q8N6H7 521 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
APTX-216ENST00000472896 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 EDC3Q96F86 508 aaKnown RBP11.14□□□□□ -0.63
APTX-216ENST00000472896 MED15Q96RN5 788 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 DBNLQ9UJU6 430 aaKnown RBP11.14□□□□□ -0.63
APTX-216ENST00000472896 GUCA1BQ9UMX6 200 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
APTX-216ENST00000472896 DOCK2Q92608 1830 aa11.14□□□□□ -0.63
APTX-216ENST00000472896 PES1O00541 588 aaKnown RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 ATP1A1P05023 1023 aaKnown RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 MYBL2P10244 700 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 HSPD1P10809 573 aaKnown RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 PTPREP23469 700 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 HMGCS2P54868 508 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 CACNB2Q08289 660 aaPredicted RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 PDCLQ13371 301 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 PICALMQ13492 652 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 CUL4BQ13620 913 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 TRIM29Q14134 588 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 GLE1Q53GS7 698 aaKnown RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 LACTB2Q53H82 288 aaPredicted RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 AP1ARQ63HQ0 302 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 NAIF1Q69YI7 327 aaPredicted RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 KRT40Q6A162 431 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 CYB5D1Q6P9G0 228 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 NLRP14Q86W24 1093 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 SERTAD1Q9UHV2 236 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 MYH13Q9UKX3 1938 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 DOCK1Q14185 1865 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 HMGB1P1B2RPK0 211 aaPredicted RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 TBC1D12O60347 775 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 GHRP10912 638 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 CCND3P30281 292 aaPredicted RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 ADORA1P30542 326 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 TBC1D8BQ0IIM8 1120 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 TSR1Q2NL82 804 aaKnown RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 FUKQ8N0W3 1084 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 MYCBPAPQ8TBZ2 947 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 CCHCR1Q8TD31 782 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 TCP11Q8WWU5 503 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 CCT8L2Q96SF2 557 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 NUP88Q99567 741 aaPredicted RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 P2RX7Q99572 595 aaKnown RBP11.13□□□□□ -0.63
APTX-216ENST00000472896 TSGA10Q9BZW7 698 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 TXNRD2Q9NNW7 524 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 MORF4L1Q9UBU8 362 aa11.13□□□□□ -0.63
APTX-216ENST00000472896 UNC80Q8N2C7 3258 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 PRC1O43663 620 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
APTX-216ENST00000472896 CYLC1P35663 651 aaPredicted RBP11.12□□□□□ -0.63
APTX-216ENST00000472896 MDH1P40925 334 aaKnown RBP11.12□□□□□ -0.63
APTX-216ENST00000472896 BTDP43251 543 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 RHBDL3P58872 404 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 XRCC4Q13426 336 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 CCL14Q16627 93 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 IMMTQ16891 758 aaKnown RBP11.12□□□□□ -0.63
APTX-216ENST00000472896 Q3C1V9 767 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 CCDC122Q5T0U0 273 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 MREGQ8N565 214 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 OR8K1Q8NGG5 319 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 ZNF384Q8TF68 577 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 FAM163AQ96GL9 167 aaPredicted RBP11.12□□□□□ -0.63
APTX-216ENST00000472896 CENPHQ9H3R5 247 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.12□□□□□ -0.63
APTX-216ENST00000472896 DENND2AQ9ULE3 1009 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 CEP131Q9UPN4 1083 aa11.12□□□□□ -0.63
APTX-216ENST00000472896 SH2B2O14492 632 aaPredicted RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms