RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 GFPT2O94808 682 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 DRP2Q13474 957 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 LRRC24Q50LG9 513 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 FANCLQ9NW38 375 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 RGL1Q9NZL6 768 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TRPM2O94759 1503 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SGSM2O43147 1006 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TTLL1O95922 423 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 BCAS4Q8TDM0 211 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 HPCAL4Q9UM19 191 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SLC4A7Q9Y6M7 1214 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 F8W8V4 182 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 FGAP02671 866 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 RXRBP28702 533 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 IMPG1Q17R60 797 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 C8orf34Q49A92 452 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 INTS9Q9NV88 658 aaKnown RBP14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SFI1A8K8P3 1242 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 EIF2AK2P19525 551 aaKnown RBP14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 KLC3Q6P597 504 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TSC1Q92574 1164 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 EPAS1Q99814 870 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 GCNT4Q9P109 453 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TCF3P15923 654 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 LIG3P49916 1009 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 GREM2Q9H772 168 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 KIAA1468Q9P260 1216 aa14.26□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PLTPP55058 493 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 USP17L2Q6R6M4 530 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 FLAD1Q8NFF5 587 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 FSD1LQ9BXM9 530 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 A6NNZ2 444 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ANP32DO95626 131 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CDC25AP30304 524 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TUBB8Q3ZCM7 444 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 RNF135Q8IUD6 432 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TAGAPQ8N103 731 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SH3KBP1Q96B97 665 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 FLOT2Q14254 428 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CCDC92Q53HC0 331 aaPredicted RBP14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PATL1Q86TB9 770 aaKnown RBP14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 RAD18Q9NS91 495 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 IREB2P48200 963 aaKnown RBP14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CACNB2Q08289 660 aaPredicted RBP14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TJAP1Q5JTD0 557 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 THEMIS2Q5TEJ8 643 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CYTH2Q99418 400 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ZNF341Q9BYN7 854 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TRIM8Q9BZR9 551 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ATP8B3O60423 1300 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ZBTB7BO15156 539 aaPredicted RBP14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CIITAP33076 1130 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 RAPGEF5Q92565 580 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 MOCS3O95396 460 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ADORA1P30542 326 aa14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 RRAGDQ9NQL2 400 aaPredicted RBP14.25□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 K7ERI5 159 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PFDN1O60925 122 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SERPIND1P05546 499 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 EEF1DP29692 281 aaKnown RBP14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 E4F1Q66K89 784 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PASD1Q8IV76 773 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PSMC2P35998 433 aaKnown RBP14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 NDUFA8P51970 172 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 IL9RQ01113 521 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CAPS2Q9BXY5 557 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ATG3Q9NT62 314 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 E2F6O75461 281 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 DYNLL1P63167 89 aaKnown RBP14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ABTB1Q969K4 478 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 MED7O43513 233 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 HSPA6P17066 643 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 NNMTP40261 264 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PHKA1P46020 1223 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 HEY1Q9Y5J3 304 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 GOLGA8QA0A0J9YX86 632 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 GOLGA8OA6NCC3 632 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 GOLGA8NF8WBI6 632 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CREB3O43889 395 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 BPIFB4P59827 614 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 IFT88Q13099 833 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ARL13BQ3SXY8 428 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CATSPER4Q7RTX7 472 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 NDUFAF2Q8N183 169 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TCP11Q8WWU5 503 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 IFT43Q96FT9 208 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 GPR101Q96P66 508 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 DOLKQ9UPQ8 538 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 DNAJC6O75061 913 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ARMCX2Q7L311 632 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ZBTB38Q8NAP3 1195 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 EDEM3Q9BZQ6 932 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CLIC4Q9Y696 253 aa14.24□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 A0A0D9SFI3 127 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 LRRD1A4D1F6 860 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 MYBP10242 640 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms