RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 ZNF317Q96PQ6 595 aaPredicted RBP11.77□□□□□ -0.53
CHMP2B-203ENST00000471660 VCX3BQ9H321 246 aa11.77□□□□□ -0.53
CHMP2B-203ENST00000471660 PREBQ9HCU5 417 aa11.77□□□□□ -0.53
CHMP2B-203ENST00000471660 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.53
CHMP2B-203ENST00000471660 PICK1Q9NRD5 415 aa11.77□□□□□ -0.53
CHMP2B-203ENST00000471660 ATP8A2Q9NTI2 1148 aa11.77□□□□□ -0.53
CHMP2B-203ENST00000471660 FAM153AQ9UHL3 310 aa11.77□□□□□ -0.53
CHMP2B-203ENST00000471660 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 PITPNM2Q9BZ72 1349 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 RARAP10276 462 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 POLE2P56282 527 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 TTF1Q15361 905 aaPredicted RBP11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 MEA1Q16626 185 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 GALNTL6Q49A17 601 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 IRGCQ6NXR0 463 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 STOX1Q6ZVD7 989 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 ARHGAP18Q8N392 663 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 FAM129AQ9BZQ8 928 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 ARHGEF10LQ9HCE6 1279 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 RNF14Q9UBS8 474 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 TRPM7Q96QT4 1865 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 PALM3A6NDB9 673 aaPredicted RBP11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 TMCC1O94876 653 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 CARSP49589 748 aaKnown RBP11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 KCNJ2P63252 427 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 SPAG1Q07617 926 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 TMEM154Q6P9G4 183 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 RNF168Q8IYW5 571 aaPredicted RBP11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 NFU1Q9UMS0 254 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 AGAP1Q9UPQ3 857 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 HYOU1Q9Y4L1 999 aa11.76□□□□□ -0.53
CHMP2B-203ENST00000471660 NRXN2Q9P2S2 1712 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 ATP5J2-PTCD1G3V325 749 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 TPD52L2O43399 206 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 TMOD1P28289 359 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 GBP1P32455 592 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 MSH2P43246 934 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 SLC4A8Q2Y0W8 1093 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 TTC39AQ5SRH9 613 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 IFT74Q96LB3 600 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 XPO6Q96QU8 1125 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 LRRC2Q9BYS8 371 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 PDE8AO60658 829 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 HIP1RO75146 1068 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 VIL1P09327 827 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 CYLC1P35663 651 aaPredicted RBP11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 FAM136AQ96C01 138 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 CAPNS2Q96L46 248 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 RPS6KC1Q96S38 1066 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 TIPINQ9BVW5 301 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 RAB17Q9H0T7 212 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 SPATA7Q9P0W8 599 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 CNOT8Q9UFF9 292 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 BZW2Q9Y6E2 419 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 CASP8AP2Q9UKL3 1982 aa11.75□□□□□ -0.53
CHMP2B-203ENST00000471660 IGF2BP3O00425 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 PRPF3O43395 683 aaKnown RBP11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 USO1O60763 962 aaKnown RBP11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 UPP2O95045 317 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 GLI1P08151 1106 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 UQCRFS1P1P0C7P4 283 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 RNF220Q5VTB9 566 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 ASRGL1Q7L266 308 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 DNAJC10Q8IXB1 793 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 FBF1Q8TES7 1133 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 NOC3LQ8WTT2 800 aaKnown RBP11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 PTPRN2Q92932 1015 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 IQCDQ96DY2 449 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 RMDN2Q96LZ7 410 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 KRT23Q9C075 422 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 UBA5Q9GZZ9 404 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 CCDC134Q9H6E4 229 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 MBD4O95243 580 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 PCK1P35558 622 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 PAFAH1B1P43034 410 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 PHEXP78562 749 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 ZNF844Q08AG5 666 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 KRT31Q15323 416 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 FOXB2Q5VYV0 432 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 TRIM68Q6AZZ1 485 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 OTUD7BQ6GQQ9 843 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 ZNF34Q8IZ26 560 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 PRCCQ92733 491 aaPredicted RBP11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 HINFPQ9BQA5 517 aa11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 BIN2Q9UBW5 565 aaPredicted RBP11.74□□□□□ -0.53
CHMP2B-203ENST00000471660 MROH5Q6ZUA9 1318 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms