RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 MTNR1BP49286 362 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 TERF1P54274 439 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 RNF4P78317 190 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 BTKQ06187 659 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 DGKKQ5KSL6 1271 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 FAM117BQ6P1L5 589 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 DARS2Q6PI48 645 aaKnown RBP7.34□□□□□ -1.23
NF1-208ENST00000471572 USP45Q70EL2 814 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 SNRNP27Q8WVK2 155 aaKnown RBP7.34□□□□□ -1.23
NF1-208ENST00000471572 CEP131Q9UPN4 1083 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 SMARCA4P51532 1647 aa7.34□□□□□ -1.23
NF1-208ENST00000471572 GOLIM4O00461 696 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 DLL1O00548 723 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 NDUFS2O75306 463 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 RGS9O75916 674 aaPredicted RBP7.34□□□□□ -1.24
NF1-208ENST00000471572 PDCP20941 246 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 CLEC16AQ2KHT3 1053 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 RNF220Q5VTB9 566 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 GPAT2Q6NUI2 795 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 ZNF610Q8N9Z0 462 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.34□□□□□ -1.24
NF1-208ENST00000471572 ALG13Q9NP73 1137 aaKnown RBP7.34□□□□□ -1.24
NF1-208ENST00000471572 SMC4Q9NTJ3 1288 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 PDP2Q9P2J9 529 aa7.34□□□□□ -1.24
NF1-208ENST00000471572 PEG3Q9GZU2 1588 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 A0A0G2JS52 829 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 MEFVO15553 781 aaPredicted RBP7.33□□□□□ -1.24
NF1-208ENST00000471572 HIP1RO75146 1068 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 MBD4O95243 580 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 LTBRP36941 435 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 CASP5P51878 434 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 NBPF8Q3BBV2 869 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 FAM47CQ5HY64 1035 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 CDC37L1Q7L3B6 337 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 ARMCX6Q7L4S7 300 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 TMC3Q7Z5M5 1100 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 PRR18Q8N4B5 295 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 TBC1D20Q96BZ9 403 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 C1GALT1C1Q96EU7 318 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 FOXQ1Q9C009 403 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 ZMAT4Q9H898 229 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 CERS4Q9HA82 394 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 GPR45Q9Y5Y3 372 aa7.33□□□□□ -1.24
NF1-208ENST00000471572 LRRN2O75325 713 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 CD4P01730 458 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 LSP1P33241 339 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 KIF23Q02241 960 aaPredicted RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 PPFIA1Q13136 1202 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 ALDH1L2Q3SY69 923 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 INTS11Q5TA45 600 aaKnown RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 MZT2BQ6NZ67 158 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 CYP26C1Q6V0L0 522 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 TTLL7Q6ZT98 887 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 KIAA1958Q8N8K9 716 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 GIMAP8Q8ND71 665 aaPredicted RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 RCBTB1Q8NDN9 531 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 FBXW5Q969U6 566 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 NAP1L5Q96NT1 182 aaPredicted RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 SMURF1Q9HCE7 757 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 RAD18Q9NS91 495 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 PHF24Q9UPV7 400 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 HMGXB3Q12766 1538 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 IFNGR1P15260 489 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 PTX3P26022 381 aaPredicted RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 CTSKP43235 329 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 MPP1Q00013 466 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 ALDH6A1Q02252 535 aaKnown RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 G3BP1Q13283 466 aaKnown RBP eCLIP7.32□□□□□ -1.24
NF1-208ENST00000471572 CNN3Q15417 329 aaKnown RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 KIZQ2M2Z5 673 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 UAP1L1Q3KQV9 507 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 TOR2AQ5JU69 321 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 ARMC3Q5W041 872 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 ESRP1Q6NXG1 681 aaKnown RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 TTC30BQ8N4P2 665 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 FAM26EQ8N5C1 309 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 RIN2Q8WYP3 895 aaPredicted RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 FBXL18Q96ME1 805 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 BOCQ9BWV1 1114 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 LRRC27Q9C0I9 530 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 TOMM22Q9NS69 142 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 SF3B6Q9Y3B4 125 aaKnown RBP7.32□□□□□ -1.24
NF1-208ENST00000471572 STARD13Q9Y3M8 1113 aa7.32□□□□□ -1.24
NF1-208ENST00000471572 H7C1D1 291 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 MEIS1O00470 390 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 PLS3P13797 630 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 AGFG1P52594 562 aaKnown RBP7.31□□□□□ -1.24
NF1-208ENST00000471572 ST5P78524 1137 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 SUZ12Q15022 739 aaKnown RBP7.31□□□□□ -1.24
NF1-208ENST00000471572 ARHGAP44Q17R89 818 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 HSF5Q4G112 596 aaPredicted RBP7.31□□□□□ -1.24
NF1-208ENST00000471572 CCDC38Q502W7 563 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 GPATCH4Q5T3I0 446 aaKnown RBP7.31□□□□□ -1.24
NF1-208ENST00000471572 C16orf59Q7L2K0 433 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 TBC1D1Q86TI0 1168 aaPredicted RBP7.31□□□□□ -1.24
NF1-208ENST00000471572 DPP9Q86TI2 863 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 UBXN10Q96LJ8 280 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 PPP1R16BQ96T49 567 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms